| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1235 |
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| Symbol | |
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| ID | 4172701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1484105 |
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| End bp | 1484830 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054242 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_660815 |
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| Protein GI | 109897560 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.207917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAGAAA ATATTAAAAT CGTACTGGTT AATACATCCC ACACCGGCAA TATTGGTTCA
ACAGCGCGCG CCATGAAAAC CATGGGCTTG AGCCAATTGG TTTTGGTTGA TCCAGTATCA
CCGCCCGACG GTAAATCTAG CGCGTTAGCT GCTGGGGCTG GGGATGTTCT GGCCAACGCG
AAAATTGTCT CTACCGTGGC AGAAGCAGTA GCGGATTGTG GTTTAGTGGT CGGCACAAGT
GCCCGTTCGC GAACGTTATC TTGGCCTATG CTTGAACCTC GCGAATGCGG CGAAAAGTTA
GTATCCGAAG TACCTAAATA TCCTGTTGCC TTAGTATTTG GCCGTGAGAA CAACGGCTTG
AGTAACGAGG AGCTACAGCA ATGTCATTTT CATGTATGTA TTCCCGCCAA TCCTGAATAT
AGCTCGTTGA ACTTGGCTGC TGCTGTACAA ACACTATGTT ACGAAATTCG CATGGCGCAT
CTTAATGAAA CGCGACGAGA GGCGAATGTG CAGGAAGAAT ACCCGCTGGC GGATGATCTT
GAAGGCTTTT ATAGCCATTT GGAACAAACC CTTCACAAAA CGAATTTCAT CATTCCGCAA
CATCCAGGTA TGGTCATGAC CAAATTACGT CGCTTGTTTA ATCGTGCTCG TCCTGAAACC
CAGGAGCTGA ACATATTGCG CGGCATATTG GCATCTATCG AAAAGTCCAG CAAAGACAAT
ACATAA
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| Protein sequence | MLENIKIVLV NTSHTGNIGS TARAMKTMGL SQLVLVDPVS PPDGKSSALA AGAGDVLANA
KIVSTVAEAV ADCGLVVGTS ARSRTLSWPM LEPRECGEKL VSEVPKYPVA LVFGRENNGL
SNEELQQCHF HVCIPANPEY SSLNLAAAVQ TLCYEIRMAH LNETRREANV QEEYPLADDL
EGFYSHLEQT LHKTNFIIPQ HPGMVMTKLR RLFNRARPET QELNILRGIL ASIEKSSKDN
T
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