| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1227 |
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| Symbol | |
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| ID | 4172693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1476482 |
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| End bp | 1477522 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054234 |
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| Product | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase |
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| Protein accession | YP_660807 |
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| Protein GI | 109897552 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTT CTGAATTCCA GTTTGATTTA CCTGAAGCCC TCATTGCGCG TTACCCCACT
AAAGAGCGGA CCGCGAGTCG ATTAATGCAC TTAGCCACAA CAGGCTTGTC GCATTTGCAA
TTCACTGACG TGGTGAACTT GATTAATCCA GGCGATTTAC TGATCTTCAA TAATACTCGC
GTCATACCTG CACGGTTACT CGGGCAAAAA GCCTCTGGTG GTAAAGTAGA AGTGTTGATT
GAGCGCATTA TTGACGAACA CCATGTTTTA GCCCATGTAC GCGCCAGTAA ATCTCCTAAA
GAGGGCACGC AACTATTACT TGAGGGCAAA GTGGAAATGG AAATGGTAGG GCGTCAAGAT
GCACTATTTA CATTAAAGCT GCTTAACCCT GAGCCTATTC TTGAGATACT CGAACAATAT
GGGCATATGC CGCTACCGCC CTATATTGAT CGCCCTGATG AAGAGTCTGA CAAAGAGCGT
TATCAAACGG TATACAACGA GAAACCAGGA GCCGTCGCCG CGCCTACCGC AGGTTTACAC
TTTGACGACG TCATTTTGAA GCAATTACGC GATAAAGGCG TAAACACAGA ATTTGTGACC
TTGCATGTTG GGGCTGGAAC CTTTCAGCCA GTGCGGGTTG ATAACATTCT AGAGCACCAG
ATGCACTCTG AGTATGCAGA GGTGCCGCAA AACGTTGTGG ATGCTATTGC TAAAACCAAA
ACGGCGGGTA AACGCGTGAT CGCTGTGGGC ACTACGTCGG TAAGATCGTT AGAGTCAGCA
GCGAAAGCAG CATTAGAAAA TGGCACTGCG CTGGCGTCGT TTTTCAGTGA CACAGACATT
TTTATTTATC CTGGCTATAA ATTTCAGGTG ATTGATGCCA TGTTGACCAA CTTTCATCTA
TCAGAATCGA CGCTCATCAT GTTAGTCAGC GCCTTTGCTG GAAAAGAAAA TGTGATGAAT
GCGTACCAAG AAGCTATTGC CCAGCAATAC CGCTTTTTCA GCTATGGCGA TGCCATGTTC
ATTGAGAAAA ACCAAGACTG A
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| Protein sequence | MKVSEFQFDL PEALIARYPT KERTASRLMH LATTGLSHLQ FTDVVNLINP GDLLIFNNTR
VIPARLLGQK ASGGKVEVLI ERIIDEHHVL AHVRASKSPK EGTQLLLEGK VEMEMVGRQD
ALFTLKLLNP EPILEILEQY GHMPLPPYID RPDEESDKER YQTVYNEKPG AVAAPTAGLH
FDDVILKQLR DKGVNTEFVT LHVGAGTFQP VRVDNILEHQ MHSEYAEVPQ NVVDAIAKTK
TAGKRVIAVG TTSVRSLESA AKAALENGTA LASFFSDTDI FIYPGYKFQV IDAMLTNFHL
SESTLIMLVS AFAGKENVMN AYQEAIAQQY RFFSYGDAMF IEKNQD
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