Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1227 |
Symbol | |
ID | 4172693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1476482 |
End bp | 1477522 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054234 |
Product | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase |
Protein accession | YP_660807 |
Protein GI | 109897552 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTT CTGAATTCCA GTTTGATTTA CCTGAAGCCC TCATTGCGCG TTACCCCACT AAAGAGCGGA CCGCGAGTCG ATTAATGCAC TTAGCCACAA CAGGCTTGTC GCATTTGCAA TTCACTGACG TGGTGAACTT GATTAATCCA GGCGATTTAC TGATCTTCAA TAATACTCGC GTCATACCTG CACGGTTACT CGGGCAAAAA GCCTCTGGTG GTAAAGTAGA AGTGTTGATT GAGCGCATTA TTGACGAACA CCATGTTTTA GCCCATGTAC GCGCCAGTAA ATCTCCTAAA GAGGGCACGC AACTATTACT TGAGGGCAAA GTGGAAATGG AAATGGTAGG GCGTCAAGAT GCACTATTTA CATTAAAGCT GCTTAACCCT GAGCCTATTC TTGAGATACT CGAACAATAT GGGCATATGC CGCTACCGCC CTATATTGAT CGCCCTGATG AAGAGTCTGA CAAAGAGCGT TATCAAACGG TATACAACGA GAAACCAGGA GCCGTCGCCG CGCCTACCGC AGGTTTACAC TTTGACGACG TCATTTTGAA GCAATTACGC GATAAAGGCG TAAACACAGA ATTTGTGACC TTGCATGTTG GGGCTGGAAC CTTTCAGCCA GTGCGGGTTG ATAACATTCT AGAGCACCAG ATGCACTCTG AGTATGCAGA GGTGCCGCAA AACGTTGTGG ATGCTATTGC TAAAACCAAA ACGGCGGGTA AACGCGTGAT CGCTGTGGGC ACTACGTCGG TAAGATCGTT AGAGTCAGCA GCGAAAGCAG CATTAGAAAA TGGCACTGCG CTGGCGTCGT TTTTCAGTGA CACAGACATT TTTATTTATC CTGGCTATAA ATTTCAGGTG ATTGATGCCA TGTTGACCAA CTTTCATCTA TCAGAATCGA CGCTCATCAT GTTAGTCAGC GCCTTTGCTG GAAAAGAAAA TGTGATGAAT GCGTACCAAG AAGCTATTGC CCAGCAATAC CGCTTTTTCA GCTATGGCGA TGCCATGTTC ATTGAGAAAA ACCAAGACTG A
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Protein sequence | MKVSEFQFDL PEALIARYPT KERTASRLMH LATTGLSHLQ FTDVVNLINP GDLLIFNNTR VIPARLLGQK ASGGKVEVLI ERIIDEHHVL AHVRASKSPK EGTQLLLEGK VEMEMVGRQD ALFTLKLLNP EPILEILEQY GHMPLPPYID RPDEESDKER YQTVYNEKPG AVAAPTAGLH FDDVILKQLR DKGVNTEFVT LHVGAGTFQP VRVDNILEHQ MHSEYAEVPQ NVVDAIAKTK TAGKRVIAVG TTSVRSLESA AKAALENGTA LASFFSDTDI FIYPGYKFQV IDAMLTNFHL SESTLIMLVS AFAGKENVMN AYQEAIAQQY RFFSYGDAMF IEKNQD
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