| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1215 |
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| Symbol | |
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| ID | 4172681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1465597 |
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| End bp | 1467198 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054222 |
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| Product | isocitrate lyase |
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| Protein accession | YP_660795 |
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| Protein GI | 109897540 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.180669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAACT ACACAAATGA CATTCAAGCT GCCCAAACCC TAACTGGCGA AAATAGCCAA
ACGTGGAGTG CTATCAACCC AGAGTATGTT GCACGTATGA AAGCACAAAA TCGCTTCAAA
ACGGGCTTAG ACATTGCGAA ATACACTGCG GGTATCATGC GTAAAGATAT GGCTGATTAT
GATAAGGACT CAAGCTCTTA TACTCAGTCT CTAGGTTGCT GGCATGGCTT TATCGGTCAA
CAAAAAATGT TGGCAATTAA AAAGCATCAT GGCACGACAG ATAAACGCTA CTTGTACTTA
TCTGGTTGGA TGGTAGCTGC TCTACGCTCT GAGTTTGGTC CTTTGCCTGA CCAATCAATG
CACGAAAAAA CGTCAGTGCC TGCGTTAATC GAAGAGCTTT ACACCTTCTT ACGTCAAGCC
GATGCAAAAG AGCTTGGTGA GTTGTTTAGC GCACTTGATA GTGCCGAAGA AGCTGGCCAA
GATACCAAAG AAATTCAAGC TAAAATCGAT AACTACCAAA CTCATGTCGT TCCAATTATT
GCTGACATTG ATGCAGGCTT TGGTAATGAA GAAGCAACGT ACTTACTTGC CAAGAAGATG
ATTGAAGCAG GTGCATGCTG TATTCAGATT GAAAACCAAG TATCTGATGC CAAACAATGT
GGTCACCAAG ACGGTAAAGT AACCGTGCCT CATGAAGACT TCCTGTGTAA AATCAATGCC
GTACGTTACG CGTTTCTTGA GCTAGGAGTA GATGATGGGG TGATTGTTGC GCGTACCGAT
TCTTTAGGTG CTGGCCTGAC TCAAAAAATC CCAGTGTCTC AATCGCCTAA CGATTTAGCT
GCCCAGTACA ATGCCTTTTT AGAAACCTCA GCAGTTGATT CTGTTGATGA TTTGAAAGAT
GGCGATTCAG TATTGAAACT TGACGGCAAG CTAGTAAAAC CAGTTCGTTT GCCTAATGGT
TTGTACAAGT TCAAAGCAGA CACTGGCTTC GACCGTGTAG TACTTGACTG CGTTACATCG
CTACAAAATG GCGCTGACTT ATTGTGGATT GAAACTGAAA AACCGCATGT TCAGCAAATT
GGTGAAATGG TAAGTGCTAT TCGTAAAGAA GTACCTGATG CGAAATTAGT TTATAACAAT
TCACCTTCAT TCAACTGGAC GCTAAACTTC CGCCAGCAAG TTTTCGATGC TTGGTCTGAA
GCAGGTAAAG ATGTGTCTGG CTACAGCCGT GATGAGTTAA TGTCAGCACG TTATGATGCC
TCTGAGCTGG CGCAAGAAGC AGATGAAAAA GTGCGTACAT TCCAAGCGGA TGCGGCTCGT
GAAGCGGGTA TTTTCCATCA CTTGATTACG TTACCGACTT ACCATACCGC AGCACTGTCA
ACTGACAACC TAGCGAAAGG TTACTTTGGT GAAGAAGGCA TGTTGGCTTA TGTGAAAGGC
GTTCAACGTA AAGAGTTACG TGAAGGGTTA GCATGCGTTA AGCACCAAGC AATGGCAGGC
TCTAACCTAG GGGATGATCA TAAAGAGTAT TTCTCTGGTG ACCAAGCGCT TAAAGCGTCA
GGCAAAGACA ACACCATGAA TCAGTTCGAC GTTGCAGTGT AA
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| Protein sequence | MSNYTNDIQA AQTLTGENSQ TWSAINPEYV ARMKAQNRFK TGLDIAKYTA GIMRKDMADY
DKDSSSYTQS LGCWHGFIGQ QKMLAIKKHH GTTDKRYLYL SGWMVAALRS EFGPLPDQSM
HEKTSVPALI EELYTFLRQA DAKELGELFS ALDSAEEAGQ DTKEIQAKID NYQTHVVPII
ADIDAGFGNE EATYLLAKKM IEAGACCIQI ENQVSDAKQC GHQDGKVTVP HEDFLCKINA
VRYAFLELGV DDGVIVARTD SLGAGLTQKI PVSQSPNDLA AQYNAFLETS AVDSVDDLKD
GDSVLKLDGK LVKPVRLPNG LYKFKADTGF DRVVLDCVTS LQNGADLLWI ETEKPHVQQI
GEMVSAIRKE VPDAKLVYNN SPSFNWTLNF RQQVFDAWSE AGKDVSGYSR DELMSARYDA
SELAQEADEK VRTFQADAAR EAGIFHHLIT LPTYHTAALS TDNLAKGYFG EEGMLAYVKG
VQRKELREGL ACVKHQAMAG SNLGDDHKEY FSGDQALKAS GKDNTMNQFD VAV
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