| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1213 |
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| Symbol | |
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| ID | 4172679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1462116 |
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| End bp | 1464290 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054220 |
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| Product | malate synthase G |
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| Protein accession | YP_660793 |
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| Protein GI | 109897538 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.262695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAT ATATTCAACG TGAACAATTA CAGGTAGCGC CTCAGCTTGC TGCCTTTATC
GAAGAGCAGG CTCTACCTAG CAGTGAAGTC GCCCCCACAG AATTTTGGGC TGGTTTTAGT
AATATTCTAG CCCAGCTCAC GCCAGTTAAT GATGCCTTAC TGGCTAAGCG CGACTTGCTA
CAACAAAAAA TCGATGCGTA TTGCCAGTCT CATCCGACCT TAGAGCCTGC GAGCTACAAA
ACTTTCCTTC AAGAAATTGG CTATCTAGAA ACGCCACCAG CAGATTTTTC TATTACCACC
GATAACGTTG ACGACGAGGT GGCTACCATG GCCGGCCCTC AACTTGTAGT GCCTATCAAT
AACGCGCGCT TCGCTCTTAA CGCTGCTAAT GCCCGTTGGG GGAGCTTATA CGATGCAGCC
TACGGTACAG ATGTTATCCC TGAAGATAAC GGCGCTACGC GGACAAAAGC ATACAATCCC
GCAAGAGGGC AACAGGTTAT ACAGTATGCA AGAAAGTGGC TCGATGTAAT CGCACCATTG
ACCAATGGCT CCCATACCAC CAGTCAAGGT TATGATATTA CTTCAGGTCA ACTAGTGGTA
ACGCTAGCCG ATGCGAGCAC AGCGACCTTG TCTCACCCTA CCCAGTTACT TGGATTTGTT
GGCGATAAAA ACAACCCTAG CGCCATTTTG TTACAACATA ACGGCCTGCA CGTAGAGCTG
CAATTTGACC GCACTCATCA AATAGGGCAA AGCGACCCCT GTGGCATGAA AGACATATTA
GTTGAATCAG CACTGACAAC CATTATGGAT TGTGAGGACT CAGTTGCCGC AGTGGATGCT
GAAGATAAAA CCTTGGTGTA TCAGAACTGG CTAGGACTGA TCAAAGGGAC GCTTGAAGTG
AGCCTAAGTA AACCAGGCGG CTCCTCCGTC AGACGTTTAA GTGCCGATAG AAATTACACG
ACGCTTACAG GCAAATCATT TTCGCTAAAT GGTCGTAGTA TGATGTTTGT GCGTAATGTG
GGCCATTTAA TGACGAACGA CGCAATTTTG TTTCAGGGTA AGCCGATCTA CGAAGGGATA
ATGGACGCGG TTATCACCAG CCTAATCGCC AAACATGACT TGCTAGGCAA TGGCCAATAT
CGCAACAGTA AAGCGGGCAG TATATATATC GTTAAACCCA AAATGCATGG CTCAGAGGAA
GTGGCATTCG CTGACACTTT GTTTAGTCAA GTAGAAGATG CTTTAGCACT GCCTAAAAAC
ACATTAAAAA TGGGCATTAT GGACGAAGAA CGTCGCACAA GTGTGAATTT GAAAGCGTGT
ATCAATGCAG CAAAAGCGCG CGCAGTATTC ATTAATACGG GCTTTTTAGA TAGAACTGGG
GATGAAATCC ATACCTCAAT GCATCTAGGG CCATTTGCGT TAAAAGCTGA CATCAAGCAA
CAGCCTTGGT TGACTGCCTA CGAGTTAGCC AACGTGAAAA TTGGTGTAGA CGCAGGTATG
TCAGGTAAAG CGCAAATTGG GAAAGGTATG TGGCCAATTC CAGATAACAT GGCTGACATG
ATGCAAAGTA AAACCAATCA CCCTCAATCG GGCGCCAACA CTGCTTGGGT TCCCTCCCCA
ACCGCTGCGA CCTTGCACGC CTTACATTAT CACCAGATTG ATGTGTTTAG TTTGCGAAAT
CCGATTGCAA GCAATGATTT TGATGGGTTA GATGATATCT TGACCGTGCC CCTCTTGGCT
GACTGTTCCA GTTTGAGCCA GCAAGACATT CAGCATGAGC TAGACAATAA CGTTCAAGGG
ATTTTGGGTT ATGTGGTTCG CTGGGTTCAT CAAGGGATTG GTTGCTCTAA AGTACCGGAC
ATCAACAACG TGGGCCTAAT GGAAGACAGA GCAACGTTAC GCATATCCAG CCAGCATATC
GCTAACTGGT TGTTACATGG CTTAATTAAC GAGGCACAAA TAAATGACTC AATGTTGCGC
ATGGCACAAT TAGTCGATGC ACAAAATAGT TCTGATAAGG AATACATCCC TATGATGCCT
GACCCAATCA AATCAATTGC GTTTCAAGCC GCTCAAGAGT TAATACTGCA AGGAACGCAG
CAACCAAATG GTTACACCGA ACCTGTTTTG CACGCTAAGC GCAGGGAAAT GAAAGATAAA
CTGGCCACTG TGTAG
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| Protein sequence | MQQYIQREQL QVAPQLAAFI EEQALPSSEV APTEFWAGFS NILAQLTPVN DALLAKRDLL
QQKIDAYCQS HPTLEPASYK TFLQEIGYLE TPPADFSITT DNVDDEVATM AGPQLVVPIN
NARFALNAAN ARWGSLYDAA YGTDVIPEDN GATRTKAYNP ARGQQVIQYA RKWLDVIAPL
TNGSHTTSQG YDITSGQLVV TLADASTATL SHPTQLLGFV GDKNNPSAIL LQHNGLHVEL
QFDRTHQIGQ SDPCGMKDIL VESALTTIMD CEDSVAAVDA EDKTLVYQNW LGLIKGTLEV
SLSKPGGSSV RRLSADRNYT TLTGKSFSLN GRSMMFVRNV GHLMTNDAIL FQGKPIYEGI
MDAVITSLIA KHDLLGNGQY RNSKAGSIYI VKPKMHGSEE VAFADTLFSQ VEDALALPKN
TLKMGIMDEE RRTSVNLKAC INAAKARAVF INTGFLDRTG DEIHTSMHLG PFALKADIKQ
QPWLTAYELA NVKIGVDAGM SGKAQIGKGM WPIPDNMADM MQSKTNHPQS GANTAWVPSP
TAATLHALHY HQIDVFSLRN PIASNDFDGL DDILTVPLLA DCSSLSQQDI QHELDNNVQG
ILGYVVRWVH QGIGCSKVPD INNVGLMEDR ATLRISSQHI ANWLLHGLIN EAQINDSMLR
MAQLVDAQNS SDKEYIPMMP DPIKSIAFQA AQELILQGTQ QPNGYTEPVL HAKRREMKDK
LATV
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