| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1200 |
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| Symbol | |
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| ID | 4172606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1448275 |
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| End bp | 1449411 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638054207 |
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| Product | hypothetical protein |
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| Protein accession | YP_660780 |
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| Protein GI | 109897525 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCTGTT TAGTATATTT CAACCGAGTA AATCGTATCT ATACCATCAC TCATTATCCA
CTGGAAGATA TTGCGCTACA TGAGGCGCTG TGGAGCGACC TTTATAAACA GTCTGATGCT
AGCGTTTTTC TTAATTGGTC ATGGATAAAA GCATGGTTAA CGTCAATAAA TTCTGTGCCG
GTTGTGTTAG CTGCATATGA AAATACCCGC TGTGTAGGTT TAGCTTTTTT AATACAGCGA
AACGCCCGTT CTTCGAGCAG AATAGATATC AAGCAACTAT GGCTGCATAG AAAAGGTGAG
CAGGCGTCAG ATCAAATGTG GATTGAGCAT AACGATTTTC TGTTGCATCA GAACAACAAA
GAGCAGATTC GTTTAGCCAT GTTGGAATAT CTGTTTGCGC AAAAAAAACT GTGGCACGAA
TTGTATTTTG GATTAACGAA TTCAAAAGTG ATTAATTCAC TTAAACTAAA CTGGCCTTCT
TGTCGAGAAG TCATTAGCTC TCCCGATTTC GAAGTCGACT TACGCTACAA AGCCAATTTA
AATGATTACT TGGCTGATTT ATCGAAAAAC ACTCGTTCGC AAATTAGGCG TACAGAAAAG
CTATTAACAC AATCAGGTGA ATTAGCGCTT ACCGTGGCTC AAACCGCAGC CCAGAAAGAA
ACGTTCCTAG AAGATATATC TCGACTACAC AAAGATAAAT GGAGAGATAC AGAATTTGGC
AGTGGATTTG ATAACCCGAT TTTTGAGCAA TTTCATAGAC ATCTGATTTT TGAAGATGAT
GTAACGAATA AAACCCGACT TTACTGCCTC ACTCTCGATA AAAAACCAAT CGCCTACATA
TATCTACTAA TAGATGATGA CACTTGGTAT TTTTACCTGT CTGCCATAAA CGGCCATGAC
GACAACAGAG TCAAAGTCGG ATTACTTGCA CATGCATATA TAATCGAACA AGCCATAGCT
GAAAAAGTCA GTAAGTATAG CTTTTTAGCA GGGGAAGCAC GCTACAAGCG TTCGTTATCA
AACCTCCCTG AAACAAGCCA AACACTGGTT TGTTTTTATC AACCCACTGT GTTTATGCGT
CTACGAGAAT GTGCACGACG ATATAAAAAC GCACTACCAA ACATATTGAG ACATTAG
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| Protein sequence | MACLVYFNRV NRIYTITHYP LEDIALHEAL WSDLYKQSDA SVFLNWSWIK AWLTSINSVP
VVLAAYENTR CVGLAFLIQR NARSSSRIDI KQLWLHRKGE QASDQMWIEH NDFLLHQNNK
EQIRLAMLEY LFAQKKLWHE LYFGLTNSKV INSLKLNWPS CREVISSPDF EVDLRYKANL
NDYLADLSKN TRSQIRRTEK LLTQSGELAL TVAQTAAQKE TFLEDISRLH KDKWRDTEFG
SGFDNPIFEQ FHRHLIFEDD VTNKTRLYCL TLDKKPIAYI YLLIDDDTWY FYLSAINGHD
DNRVKVGLLA HAYIIEQAIA EKVSKYSFLA GEARYKRSLS NLPETSQTLV CFYQPTVFMR
LRECARRYKN ALPNILRH
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