| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1193 |
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| Symbol | |
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| ID | 4172599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1438362 |
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| End bp | 1439477 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054200 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_660773 |
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| Protein GI | 109897518 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAC TTCATCTTAC ATTTGATATG CGTATCGGCG GTACGGAGCA GGTAATTAAA
AACCTAATTT TAGGAGCCGA CGCTTCACGC TTTACTATGT CAGTGCTGTG CATTGAATCA
CCTCTTGGGC CGTTTGCTGA AGACTTGATC AATAATGGCA TTCACATAGA AGCTCTAAGC
CGCAAACCTG GCTTCGACAT GAGCTTGATA TCCAAAATAC GCCAACATAT TACAACGCAT
AAAATCGATA TTATTCACTG TCATCAATAT ACCCCCTACG TTTACGGTGT GTTAGGTGCA
TTAGCAACGT CAGCAAAAAT CGTTTTCACT GAACACGGTC GGTTTTACCC AGATTCAACC
ACCTGGAAGC GCAAAATAAT CAATCCTATT CTGCACCGTT TCACGCATGC GACCACAGCT
ATTTCAGCAG CAACACGTGA TGCTCTTGTG GAATTCGAGT ATATCCCCAG TAACGATATT
GACGTAGTTT ATAACGGGAT TAAGGGTGTT GAACCCGTGC CGGCGAAATT AGAAGATGTG
CAACGACAAT TCCCTCTGAC TCAAGAGTGT ATTTTGTTTG GCACTATTGC TAGGCTCGAC
CCGATAAAAA ACCACAGTAT GATGCTAAGG GCATTTAAAC GGGTTATTGA TGCTGGCGTA
AACGCAAAGT TGATGATTGT TGGCGATGGT GAAGAGCGAG AAAACACAGA GGCATTAATA
AGTACCCTAG ATTTGTCACA AAGCGTAATC ATGACCGGCT ATGAGCCAAA ACCTCATGCC
CATTTAGCAT TGATGGATAT TTATCTACTG CCCTCACTCA GCGAAGGCAC ATCCATGACG
CTGTTAGAAG CGATGTCATT GAGTAAGCCT TGCATTGTGA CCCACGCAGG AGGCAACCCC
GAAATCGTTT TACACGACGT CACAGGTCTT GTCACACCAA ATGACGACGA GCAAGCTTAC
GCAGATGCAA TGATAGCGCT GGCACAAAAT AAGCAACTAC AAGATACCTT CGGTAAAGCG
TCCAAAATAC GGTTTGAAAA TACGTTTGAT ATTAAAAATA TGACACAAGC ATATGAAGCG
CTTTATTTGC GATTATTCTC AAGCGTGCAG GCATAG
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| Protein sequence | MNILHLTFDM RIGGTEQVIK NLILGADASR FTMSVLCIES PLGPFAEDLI NNGIHIEALS
RKPGFDMSLI SKIRQHITTH KIDIIHCHQY TPYVYGVLGA LATSAKIVFT EHGRFYPDST
TWKRKIINPI LHRFTHATTA ISAATRDALV EFEYIPSNDI DVVYNGIKGV EPVPAKLEDV
QRQFPLTQEC ILFGTIARLD PIKNHSMMLR AFKRVIDAGV NAKLMIVGDG EERENTEALI
STLDLSQSVI MTGYEPKPHA HLALMDIYLL PSLSEGTSMT LLEAMSLSKP CIVTHAGGNP
EIVLHDVTGL VTPNDDEQAY ADAMIALAQN KQLQDTFGKA SKIRFENTFD IKNMTQAYEA
LYLRLFSSVQ A
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