| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1189 |
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| Symbol | |
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| ID | 4172595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1432685 |
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| End bp | 1434565 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638054196 |
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| Product | hypothetical protein |
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| Protein accession | YP_660769 |
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| Protein GI | 109897514 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACA TAAAAATAAA AAAAACGCGA CGTATTGCTA ATTTGATAAG CAATTTATTT
GTTTTCGTTG GGTCTCCGGA CGCTCATATA GCTCATATAA AGCAATTAAC GGACACCCTA
GATTACCCAG CTAGAATGAG GCAGTTTTTA CACTACGCGG CAGCGCAAGA AAACAATGCA
CTCGATGAGC CCGTATTCAT ATTTTCAGCG GGCTGGCGAT CAGGCTCAAC TTTATTACAG
AGGCTGTTGT CATCATCTCA TGATCTGTTT TTATGGGGTG AGCCTCATGA TAAATGCAAT
ATTATACAAT CTTTAGCCGC TACGATTAGG CCCTTCACAC TGAAATGGCC GCCTAGAAGA
TACATAGTTG ACAATGTCTC GAATGAGCAA AATGCAGACA AATGGATAGC AAATCTCTAC
CCAGATGAAG CTCATCTATT AGCCGCGCAC AGGAACTTCT TAAGAACGCT TTTCACTCCA
CTTAGCGGTG AAAAGCGATG GGGGATTAAA GAAGTCCGTT TCGGTCTTGA AGAGGCCATA
TTTTTAAAAG CACTTTTTCC AAGGGCGAAA TTCCTTTATT TGAAAAGGGA TTTGAACGAC
GCGTACTTGT CTTACAAAAG CTTTAGCCAG CATATGAACT GGTATGCAAA ATGGCCTACG
AAACCGGTTT TCACTCCCTT CTCCTTCGCC AAACATCGAG CTCGACTAAT TCGAGAGTTG
TCATATGCAC AGAAATTAAC CGGTGGTTTG ATCATTGATT ATAGAGACCT TGTATCACAG
CCTGAAGTGC TCCGTAACAT TGAGGAGTAT TGCAAGGTCA AAATCGATCA AAGTATTATT
GAAAAAAAGA TCGGCAGCGG TTTAAGTTAT GTGAACACTG TCACACCCTC TCCAAACATT
AGCTCAGTTG AGTCATTGCT ACTCAAGCTA GGCAATATCA AAGGTAGCAA GCAAACTTTG
AAGGTAAGCT TTTTATGCAA CATGATGGAT TGGCTTGATA CACGTGCATT ATTGCCTTCT
TCGGCACAAA AACTAACAGT GAATCACACA AAAAATGCGG TAAAACCGTC TGACATTCAT
TCTTCGGATT TATCTCCTCT CTATCATTCT CTTCCCAAGA CAGATGACCA TCCTGATTTT
AGTAACATTC CGTTTGTGTT AAAAGAATGC ACCGAACAAA CCGCACCGAT CGAAAAAGCA
AATATAGGCG TTATCATTGA AACAAGAGAG CACCCGCTAT TAGAAAAGGT GGTCTTTGAT
TTTATTAAAA TAACCGATTG TCGAGTTCAA CTATTTCATA GTCAGCAAAA TCTCGCTTTT
ATCCAATCAA CCGAAATAGC GGATCTGGTT GCAAGCGGTA AAGTTTTATT AACCAAACTA
AATATTCACG ATTTAAGTGC GAAAAGTTAC AATGCAATTT TCTTATCTCC TATATTTTGG
AACTGCATTG CATCGCGTAG TAAAATTGTT GTATTTCAAA CGGATTCCTT ACTCTGTCCT
AAATCTAAAT TTGTGTTAAA AGATTTTCTC CACTTTGACT ACATAGGCTC ATGGTGGGAG
CGCAAAAGAC CTATCGGTTT AACAATAGAT GGAGGGAATG GCGGTCTTAG CATACGAGAT
TGGCACTTAA GCTCTGAGTG CTTAACAAGA TTTCCGCCAC TAGATTGGCC TGGTGGAGAG
GATGGATTTT TTGCTTTTCA TATGGATTTA CTGGGCGGGC GCGTCGCAAG AGGCACGGAA
TGCGCGAAAT TTAGTACCCA GTATAAATAC CTAGCAGACA GCTTCGGATG CCACAAAGTA
TCTTGCTTAA ATAAAAAGAG TACTAAACAA TTTTTGAAAT ACTTCCCAGA TGCAAAATTA
TTATTAAAAC AAAAACGCTA A
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| Protein sequence | MADIKIKKTR RIANLISNLF VFVGSPDAHI AHIKQLTDTL DYPARMRQFL HYAAAQENNA
LDEPVFIFSA GWRSGSTLLQ RLLSSSHDLF LWGEPHDKCN IIQSLAATIR PFTLKWPPRR
YIVDNVSNEQ NADKWIANLY PDEAHLLAAH RNFLRTLFTP LSGEKRWGIK EVRFGLEEAI
FLKALFPRAK FLYLKRDLND AYLSYKSFSQ HMNWYAKWPT KPVFTPFSFA KHRARLIREL
SYAQKLTGGL IIDYRDLVSQ PEVLRNIEEY CKVKIDQSII EKKIGSGLSY VNTVTPSPNI
SSVESLLLKL GNIKGSKQTL KVSFLCNMMD WLDTRALLPS SAQKLTVNHT KNAVKPSDIH
SSDLSPLYHS LPKTDDHPDF SNIPFVLKEC TEQTAPIEKA NIGVIIETRE HPLLEKVVFD
FIKITDCRVQ LFHSQQNLAF IQSTEIADLV ASGKVLLTKL NIHDLSAKSY NAIFLSPIFW
NCIASRSKIV VFQTDSLLCP KSKFVLKDFL HFDYIGSWWE RKRPIGLTID GGNGGLSIRD
WHLSSECLTR FPPLDWPGGE DGFFAFHMDL LGGRVARGTE CAKFSTQYKY LADSFGCHKV
SCLNKKSTKQ FLKYFPDAKL LLKQKR
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