| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1188 |
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| Symbol | |
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| ID | 4172594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1431559 |
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| End bp | 1432641 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054195 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_660768 |
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| Protein GI | 109897513 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA ATAAAACTTA TGCTGTCCAT TTACCGGACT ACCGTAACGC GAATCCATAT
CAGTCCCTTC TGGCTAGTGC ACTAAGTAAG GAGCACGTAG AAACGGCATT CATCCCTTTT
TCACTCTCAC TTTTGCCCTT AACCAAAAGC ATCAAAGGAA TGAAAAGTGT AGATGTAGTT
CACGTACACT GGATTACAGA TATACTGCAG CCACTGATGT GGACCAAGTC AAACTTAGTT
TTTTATATCA AATTTTCACT CTTAATAATC GATGTTTTTT TGGTCAGATT AAGAGGCAAG
AAAGTCGTAT GGACCGTGCA CAACAAGTTG GCACATCAGC AGTTAAATAC TAAACGAGAG
TTACTTGTAC GAAAATGGCT TGCGAAATCT GTAAATCGCG TCATTTTTCA CAGCATAGAA
GCACAAGAAT TAGTATCAAA TATGCTTAAT ATTGATATCC GCTCTAAGTC AAAAATCATA
TTTCATGGTA ACTATTTAGG CAGTTACCCA GCGCCAAGCA ATAGCAAATT GGACCTGCGA
GAACGCTACG GTCTGCCTAG TTCAGGGAGA TTAATCAGTT ATGTTGGCGT GCTGAGGCCA
TACAAGGGCA TAGAAACCTT GATAGAGGCC TTCAGTAAAG TGCAGAGCAA AAGTATGCGT
TTGCTTATCT CTGGCAACCC AAATTCGACA CAATACAAAG CGCAATTAGC ACAAATGGCC
ATAGACAATA GCAGGATAAG CACTGACTTT CAGTTTCTAC CAGATCAGAA AATGGTCGAT
TATTTAGCAA TGTCAGACGT TATTTGTTTG CCCTTCAGCG ATACCCTTAC CTCAGGCTCG
ACAATTTTAG CCATGTCTTA CGCTAAGCCC CTAATTTTGC CAGAAACGGC AAAGGTGTTT
GGCTGTGTTC CAACAAATGG GGCGTTCTAT TTTGGTGAAA AAGAAAGCCT TGCTGATGTC
TTAAATAAAG TCTCTAGCCT CACCGATTCA AAACTACACG AAATGGGAGA GGCTAATTTG
TTACAAGCTA AGAAAATGTC TTGGGAAACG GTTGGTAAAC TGACCGCGGT GGCTTATCTG
TGA
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| Protein sequence | MKNNKTYAVH LPDYRNANPY QSLLASALSK EHVETAFIPF SLSLLPLTKS IKGMKSVDVV
HVHWITDILQ PLMWTKSNLV FYIKFSLLII DVFLVRLRGK KVVWTVHNKL AHQQLNTKRE
LLVRKWLAKS VNRVIFHSIE AQELVSNMLN IDIRSKSKII FHGNYLGSYP APSNSKLDLR
ERYGLPSSGR LISYVGVLRP YKGIETLIEA FSKVQSKSMR LLISGNPNST QYKAQLAQMA
IDNSRISTDF QFLPDQKMVD YLAMSDVICL PFSDTLTSGS TILAMSYAKP LILPETAKVF
GCVPTNGAFY FGEKESLADV LNKVSSLTDS KLHEMGEANL LQAKKMSWET VGKLTAVAYL
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