| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1186 |
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| Symbol | |
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| ID | 4172592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1429176 |
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| End bp | 1430093 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054193 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_660766 |
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| Protein GI | 109897511 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAA AGTGTATTGA TCAAGAAAAG TTCGATGTAT CTATCGTAGT ACCAGTCTTC
AATCGTCGTG AACGCTTGCA AATTGTTGTT AATTCTCTCA TGGCGCAAAA TTTCACTGGC
AACTATGAAA TAATAATTGT AGATGACGGT TCAACGGACG GGACGGGCAA GGATTTACAC
GACCATGATG GAAAAACTCG TGTCATAAGA CAAGAAAATC AAGGCGCAGC TGCAGCGAGA
CATACAGGTG TTGCTCACGC CAAGGGAGAT ATTGTTGTTT TTAACGATTC AGACGATATT
GCTTACCCAG ATAAACTGCA GGTACTCTTT GATGCACTAC AAGCAAATCC CCATTGTGTT
GCGGCTATCG CGGTTGTCAA AAACCCTTCG AAGGTAGATT GGTCTCCACC TCTGTGGGTT
AACGAAATGG ATGGAAGTTA TCTAGTAAAT AATGCTCCCT TAGATCACTT TTTCAATAAT
TATTACCCCA TCGCAGCAGC AATGAACATC GCTGTAAAAA GAGACGTAGC TTATTTTGCA
TCGAAAGAGT CTGAATATTA CCGCGCTGCC AATGATTTCC ATTTTCAATT TAAGGTCGCG
ACTAAGGGTG CAATAGTCTG TGTATCAAAG ATAACCAACG AATATTTTGT GGGGCAAGGC
ATAACAACAG TTCAAGGGAT TCATACGCAA GCGGCATACG CATTAATATC TTTAGCTGAT
AACTATAGTG CGTTAGGCAA GCCCCCTCAA TTTGCTCTAT CGGTACAAAA CCGTATTGAG
AACGGGTCAT CACATGTTTT AAAGCCGTTA CTCAAGAGCC GTAAATTTGG ACTTTTATTC
GCGGTATGCA AAAACATGCT GCGATACTCC CGCTTAAAGC AAATCCCTAG AACCGTATGG
TGGGCAATAT CCTCATAA
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| Protein sequence | MNPKCIDQEK FDVSIVVPVF NRRERLQIVV NSLMAQNFTG NYEIIIVDDG STDGTGKDLH
DHDGKTRVIR QENQGAAAAR HTGVAHAKGD IVVFNDSDDI AYPDKLQVLF DALQANPHCV
AAIAVVKNPS KVDWSPPLWV NEMDGSYLVN NAPLDHFFNN YYPIAAAMNI AVKRDVAYFA
SKESEYYRAA NDFHFQFKVA TKGAIVCVSK ITNEYFVGQG ITTVQGIHTQ AAYALISLAD
NYSALGKPPQ FALSVQNRIE NGSSHVLKPL LKSRKFGLLF AVCKNMLRYS RLKQIPRTVW
WAISS
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