| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1184 |
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| Symbol | |
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| ID | 4172590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1426568 |
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| End bp | 1427806 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054191 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_660764 |
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| Protein GI | 109897509 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGGGGA ATATAAACAG CCTTAAGCTC CCACTTATCG CGATAGCCTT ATTCGTGATC
CCGTGTTTCT TGCAAGGGTT ATGGCCAAGG TTTAAAGACC CTATAAGTAA ATTGTTACTT
GTTTACTTAG TCCTAACCGT AGTGACTCAA TTTACATCTT CTTGCATACC TATTGGCTTT
AGAATTAGTT ATTTTCAACA GTTCGCAGTA TTACTACTAG CGATTTTCCT CACTATCAGA
GTGACAGATA ACGAACAACG TTTTTGCTGG ATTATTGCAG TTGTAGGCTT ATCACTCGCG
TTTCATTCTG GCAAAGCTGG TTTGCTCGGA ATGCTGGGCA TGGGCGGCAC CTATTACGGA
GCCTCTACCA TGCAGGGATT GTTTGCCGGC AGTAACGGTT TTGCATTTGG TTCTGCAGTA
TTACTATTCT TTAACCTTTT CATCGTAAGG ATGGCTTATG CCCAAAATGC GCTGTTTTAC
TTACCAGAGA TGGTTCGCTC ACAAAGAACA CTGAAACTTA TAAAAATCTT CGGTCCAATC
GTTTGCATAG GTATCATTTA TAACGTGATA ACCCTATTTT CAAGGGGTTC AGCCTTGGCC
ATGTTCTTAG GCCTTGCTCT TTGGTTTAGC TTATCGAGCT TATTGAAGTT TAAACACATT
ATCATCATGA GCATCATTGG TGTTTTAGGT TTGAGTGTCG TCGGATTACC AGATGGCTAT
AAGGATCGCA TTGCGAGTGC ATTCGTCGAA GATGAGGAGT TAGATGATTC AGCGGCTTCT
CGGCCCCACT TTTGGGGCAT AGCTATGGAA ATGGTTGCCG ATAATCCATT AGGTGTGGGA
CCTGGCTGCT ATAACACCTA CTACCCAATT TATGACAGTT CATTTGGTAA ATATGGTATG
TACAGAACCG TTCACAGTGC TCACTTTGAA GTGATATCTG AAATAGGCTA TTTGGGCGCA
CTAAGTTGGC TCCTTTTGTA CGTGATCTCC ATTAAAAAAT TATTCTACAT TCGAAAATCG
GTAAAGCTAA CCCCTATTAA TAAAGAACAA GACGAGTTTT ATGTTAATGC TGCAAACCTA
CTTATTGCCG CCATTACGGT TTTTCTGATT GGATCTTCTT TTTATGCTAT GGCATATAAC
GATATTATTT GGTTGCTATG GGGACTCACT GCAGTTTTAA TCACCTTATT TAAGCAATAT
TCATCCCAGT CTCAAAAGGA CCTGAAGGTA AAAACATGA
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| Protein sequence | MWGNINSLKL PLIAIALFVI PCFLQGLWPR FKDPISKLLL VYLVLTVVTQ FTSSCIPIGF
RISYFQQFAV LLLAIFLTIR VTDNEQRFCW IIAVVGLSLA FHSGKAGLLG MLGMGGTYYG
ASTMQGLFAG SNGFAFGSAV LLFFNLFIVR MAYAQNALFY LPEMVRSQRT LKLIKIFGPI
VCIGIIYNVI TLFSRGSALA MFLGLALWFS LSSLLKFKHI IIMSIIGVLG LSVVGLPDGY
KDRIASAFVE DEELDDSAAS RPHFWGIAME MVADNPLGVG PGCYNTYYPI YDSSFGKYGM
YRTVHSAHFE VISEIGYLGA LSWLLLYVIS IKKLFYIRKS VKLTPINKEQ DEFYVNAANL
LIAAITVFLI GSSFYAMAYN DIIWLLWGLT AVLITLFKQY SSQSQKDLKV KT
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