Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1180 |
Symbol | |
ID | 4172586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1422592 |
End bp | 1423407 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638054187 |
Product | sulfotransferase |
Protein accession | YP_660760 |
Protein GI | 109897505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.572064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA AGGTTCGAGA CTTACCTAAT TTTATCTGTA TAGGCTCACA GCGCGCAGGT ACAACGTGGC TACATAACTG TTTGGATGAG CACCCTGAGG TATTTGTACC TGCAGAGAAA GAGCTGCACT TCTTTGACCG CTTCTACGAT ACTGGACTAG CGAGCTATAC AGAGCGATTC ATGCTAACAC AACGTGGATC GGCCAAAACT TGGGGAGAAT TAACACCCAA TTATTATCAA GAACCTCAAG CTCTTGAGCG TATAAAACGA GACATTCCGG ACGTAAAAAT TATTTATATC CTTCGGCAGC CGGCGGAACG CGCATTTTCT CAGTACCAAC TTTATTCACA AGGTCAGTTT TCTGGAATGA GCTTCGAAGA AGTGATCGCA AATAAAGAGT TTGTTACGGA TTTGAGTATG CAGGGCAAGC ATTTACAACG GTTATATTCA TTGTTCGATA GCTCCCAGGT GCTAGTTTTG TTCTATGATG AGCTATCTCA GTCACCTGAG ACTTTCCTAA AAAAAGTTTT TGCGTTCTTA CAAGTAGATC CTGATTTTAT GCCAAGCACC TTGAATAAAC GGATCAATCG AGTTGTGTTG CCTGATCTGC AAGCGCGATT AGCCAAATGG AAGCTGACTT GGGTGATCGA ATTAGTTAAA GCATCGCCAA TAGCCGAGTG GGTGAAAGAA GTTGCACACA AAAAGTCAGA TAAGCTAGGA AAATCTGCTT TTCCTAATGC TCTGAGTGGT CGATTCGATG AAGATATAAA ACTAATAGAA CAGATACTAG ACATAGACTT AAATCATTGG CGTTAG
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Protein sequence | MNLKVRDLPN FICIGSQRAG TTWLHNCLDE HPEVFVPAEK ELHFFDRFYD TGLASYTERF MLTQRGSAKT WGELTPNYYQ EPQALERIKR DIPDVKIIYI LRQPAERAFS QYQLYSQGQF SGMSFEEVIA NKEFVTDLSM QGKHLQRLYS LFDSSQVLVL FYDELSQSPE TFLKKVFAFL QVDPDFMPST LNKRINRVVL PDLQARLAKW KLTWVIELVK ASPIAEWVKE VAHKKSDKLG KSAFPNALSG RFDEDIKLIE QILDIDLNHW R
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