Gene Patl_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1180 
Symbol 
ID4172586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1422592 
End bp1423407 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content42% 
IMG OID638054187 
Productsulfotransferase 
Protein accessionYP_660760 
Protein GI109897505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.572064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA AGGTTCGAGA CTTACCTAAT TTTATCTGTA TAGGCTCACA GCGCGCAGGT 
ACAACGTGGC TACATAACTG TTTGGATGAG CACCCTGAGG TATTTGTACC TGCAGAGAAA
GAGCTGCACT TCTTTGACCG CTTCTACGAT ACTGGACTAG CGAGCTATAC AGAGCGATTC
ATGCTAACAC AACGTGGATC GGCCAAAACT TGGGGAGAAT TAACACCCAA TTATTATCAA
GAACCTCAAG CTCTTGAGCG TATAAAACGA GACATTCCGG ACGTAAAAAT TATTTATATC
CTTCGGCAGC CGGCGGAACG CGCATTTTCT CAGTACCAAC TTTATTCACA AGGTCAGTTT
TCTGGAATGA GCTTCGAAGA AGTGATCGCA AATAAAGAGT TTGTTACGGA TTTGAGTATG
CAGGGCAAGC ATTTACAACG GTTATATTCA TTGTTCGATA GCTCCCAGGT GCTAGTTTTG
TTCTATGATG AGCTATCTCA GTCACCTGAG ACTTTCCTAA AAAAAGTTTT TGCGTTCTTA
CAAGTAGATC CTGATTTTAT GCCAAGCACC TTGAATAAAC GGATCAATCG AGTTGTGTTG
CCTGATCTGC AAGCGCGATT AGCCAAATGG AAGCTGACTT GGGTGATCGA ATTAGTTAAA
GCATCGCCAA TAGCCGAGTG GGTGAAAGAA GTTGCACACA AAAAGTCAGA TAAGCTAGGA
AAATCTGCTT TTCCTAATGC TCTGAGTGGT CGATTCGATG AAGATATAAA ACTAATAGAA
CAGATACTAG ACATAGACTT AAATCATTGG CGTTAG
 
Protein sequence
MNLKVRDLPN FICIGSQRAG TTWLHNCLDE HPEVFVPAEK ELHFFDRFYD TGLASYTERF 
MLTQRGSAKT WGELTPNYYQ EPQALERIKR DIPDVKIIYI LRQPAERAFS QYQLYSQGQF
SGMSFEEVIA NKEFVTDLSM QGKHLQRLYS LFDSSQVLVL FYDELSQSPE TFLKKVFAFL
QVDPDFMPST LNKRINRVVL PDLQARLAKW KLTWVIELVK ASPIAEWVKE VAHKKSDKLG
KSAFPNALSG RFDEDIKLIE QILDIDLNHW R