| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1178 |
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| Symbol | |
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| ID | 4172584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1419904 |
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| End bp | 1421034 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054185 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_660758 |
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| Protein GI | 109897503 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | [TIGR03087] sugar transferase, PEP-CTERM/EpsH1 system associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTTCTC CCTATGAACA ATGCGACGAG TTACCCTACT TCACCGAGTT AAAATCTCAA
TACGGCGTTA ACGTTCACAG CTTCAGGCTC CCACCAAAGC TTCTTCGCCT TATGTCGGGG
TTCGTGCAAG GAAAGGCGTT GAGCGTCGCT AATTTTTCCA GTGCAGAGCT ACAAAAAGGC
TTAGATCAAC TGCTGGACGA ACACGACTTT AGTGCCTTAG TGTGCACAGC ATCGAGCATG
GCTGAGTATA TTTTTAATAG CCAAGCCAAA GTGATTAAGG ATAGAGAATT AAGACTTTTC
ATGGATTTTA TGGATTTAGA TTCTGATAAA TGGCGCCAAT ATGCTCAGCG CTCATCTCTA
CCAATGAAAC TGTTGTACTC TCGCGAAAAA AACCTAATTT CAGCATTGGA GGTCCAAGTT
GCATCTCACT TCAATACATG CTTTTTTATT ACGGAAACTG AAGTCGCATT ATTTAAGCAA
GGAGCACCAG ACCTGGGAGA TATTTGCGCA ATTGAAAATG GTATTGATAC AGTTGGATTT
TGCCCCCCTG ATGTTCCTCG TTTTCGCGAA AGCCCGATAT TATTGTTCAC TGGTGTAATG
AATTATTCTC CTAATGTAGA TGCTGTCCTT TGGTTCGTGG AAAATGTTTG GAAAGATATT
GTGCAGATTT GGCCCAGTGC TGAATTTGTC GTTGCCGGTA TGGATCCAAC CGAAAAAATA
ATAGCATTGG GAAATATGAG AGGGATAACC GTAACAGGGT TCGTGGACGA TATTAAACCG
TATTTCAACA GAGCAAATGT GTTCGTCGCG CCTTTTAGAA TAGCACGGGG AGTGCAAAAT
AAGGTATTAC AAGCTTTCGC CTGTGGTCTA CCTGTTATAT CTACTCCTAT GGGGGCTGAG
GGTATACGTT GCACTGAGAA CAAAGATATT CTACTGGCGG AAACAAGTAG TGATTTTATT
CTACAGCTCG AAAAATTATT TCAATCTCCT GAACGTTACG CGCGCATTGC CGAAAATGCG
CTGCAGTTAA TTCAACAACA CTATACTTGG GAAAGTATAT TAGCCCCATT TGAAAATAAA
CTTTTAATAA ATCAGACTGA GCTCATTTCG ACGAGTCAAA CTAATAAATG A
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| Protein sequence | MISPYEQCDE LPYFTELKSQ YGVNVHSFRL PPKLLRLMSG FVQGKALSVA NFSSAELQKG
LDQLLDEHDF SALVCTASSM AEYIFNSQAK VIKDRELRLF MDFMDLDSDK WRQYAQRSSL
PMKLLYSREK NLISALEVQV ASHFNTCFFI TETEVALFKQ GAPDLGDICA IENGIDTVGF
CPPDVPRFRE SPILLFTGVM NYSPNVDAVL WFVENVWKDI VQIWPSAEFV VAGMDPTEKI
IALGNMRGIT VTGFVDDIKP YFNRANVFVA PFRIARGVQN KVLQAFACGL PVISTPMGAE
GIRCTENKDI LLAETSSDFI LQLEKLFQSP ERYARIAENA LQLIQQHYTW ESILAPFENK
LLINQTELIS TSQTNK
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