| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1166 |
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| Symbol | |
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| ID | 4172572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1405719 |
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| End bp | 1407476 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054173 |
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| Product | potassium efflux system protein |
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| Protein accession | YP_660746 |
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| Protein GI | 109897491 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAA TGGGTTCGGC AGTAGTATTT TTGGTGGCAG CAGTGGTGGC CGTTCCTATT
TTTAGAAAGT TAAAATTAGG CGCTATTTTA GGGTATCTTG TTGCAGGCGT TGTAATCGGG
CCATCTGTCA TGGATTGGGT CAACGATCCG CAGACTATTT TGCACGTCGC TGAGTTAGGT
GTGGTCTTCC TACTTTTCAT TATTGGTTTA GAGCTCGACC CCAAGCAGCT CTGGGAAATG
CGTAAAAAAA TAATGCTAAC TGGCGGCTCA CAGCTTATTT TCAGTGCAAC CTTTATCGCC
CTAATGTGTT CTTCAATCCT TTCTTTATCA ATCGTCACTT CATTGGTGGT TGGTTTATCT
GTAGCACTCT CTTCTACTGC GTTCGCTGTA CAGCTAATGG AAGAGCACGG AGTATTAAAG
ACGCCGCCTG GTCAACAGGG CTTTTCAATC CTGCTTATGC AAGATGTGGC AGTTATTCCG
ATACTATTGC TTGTTGCTAG TCTTTCCTCA GGTGATGTAG CGACTGGGCC AGCTTGGTGG
GTAAGTGTAT TGGCTTTGTG TGCGGTGCTG GTGGTTGGGC GCTTCTTAAT AAACCCCTTC
TTGAGCTTGA TTTCATTGTA TGGCAATTCT GAGGTGATGA CGGCATCGGC TTTATTAATT
GTTATCGCCA CTGCGCTGGG GATGCAGGAG GCTGGACTTT CAATGGGGAT GGGGGCCTTC
GTCGCGGGTA TTTTACTGGC GAACTCAAGC TTTAAACATC AACTTGAGAC GGAAATAGCA
CCGTTTAAAG GGCTATTTCT AGGGTTGTTT TTCATCGCGA TTGGGATGAA CTTAAATCTA
GCGCTTTTGG TCTCAGAACC TTTGTTTATT CTGGGGGCGA GTGCAGTGCT TGTATTGGTC
AAGGGCGGCG TTATATTTAC CATTTTAAAA ATGGCAAAGC AAAACACGAC TGATGCAGTA
AGAATAAGTT TAATGCTCTC ACAAGGTGGC GAATTTGCCT TTGTAGTGAT GTCACAAGCG
GAAGTAACGG GTGTTGTTGA AACACTCATT TCTCAGCAAG TAACTCTAAT TGTAGGGATT
TCAATGGCAT TGACATCTCC GCTGGTCATA ATGCATAGCG TGTGGTTCAA CAGTAAAAAT
TGCCCAGCGG TTTATGATGC AGAGCCAGAT GAGAAAGAGC CTAAAGTTCT GATCGCGGGC
CTCGGGCGTT TCGGTCAGGT ATCTGCACGT ATCTTAACGG CAAACAAAAT TCCTTTTATC
GCGCTTGATA AAGATCCTGA GCAGATTGAG TTTCTGAAAA AGTTCGGCAG TAAGGTGTTT
TATGGAGACG CTAGTCGGCT GGATCTATTA CGTACGGCTG GTATAAGCAA GGTTAAGGTT
ATACTCATAG CAATAGATAA CGAGCAAGAG GCACTTAAGA TCGCCTACTT GGTGCGTGAT
CACTTCCCTG ATATTAAAAT TATCGCCCGT GCACGCAATC GTATGAGTGT GATTAATTAT
GCAAGAGCAG GTGTGAATAC TTATGTGCGG GAAGCCTTTC CTGCGGGTTT AAAGGCTGCA
GAAAAACTGT TACAAGCTTA TGGGTTCGAT GAGGAGAAAG CACTTCGTAC CGTGGAAGTT
TTTGCGAAAC ATGATGATAA ATTAGTGCAC ATTAGCGCCA CTAAAAACCT AAACCTCCAG
CAAATGATTG ATATTAATGA GCAAGGTAAG ACAGAGCTGC AATCCCTATT CGAGCGAGAC
GAAAAAGGGA TTAAATGA
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| Protein sequence | MSLMGSAVVF LVAAVVAVPI FRKLKLGAIL GYLVAGVVIG PSVMDWVNDP QTILHVAELG
VVFLLFIIGL ELDPKQLWEM RKKIMLTGGS QLIFSATFIA LMCSSILSLS IVTSLVVGLS
VALSSTAFAV QLMEEHGVLK TPPGQQGFSI LLMQDVAVIP ILLLVASLSS GDVATGPAWW
VSVLALCAVL VVGRFLINPF LSLISLYGNS EVMTASALLI VIATALGMQE AGLSMGMGAF
VAGILLANSS FKHQLETEIA PFKGLFLGLF FIAIGMNLNL ALLVSEPLFI LGASAVLVLV
KGGVIFTILK MAKQNTTDAV RISLMLSQGG EFAFVVMSQA EVTGVVETLI SQQVTLIVGI
SMALTSPLVI MHSVWFNSKN CPAVYDAEPD EKEPKVLIAG LGRFGQVSAR ILTANKIPFI
ALDKDPEQIE FLKKFGSKVF YGDASRLDLL RTAGISKVKV ILIAIDNEQE ALKIAYLVRD
HFPDIKIIAR ARNRMSVINY ARAGVNTYVR EAFPAGLKAA EKLLQAYGFD EEKALRTVEV
FAKHDDKLVH ISATKNLNLQ QMIDINEQGK TELQSLFERD EKGIK
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