| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1158 |
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| Symbol | |
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| ID | 4173209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1399774 |
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| End bp | 1400535 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054165 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_660738 |
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| Protein GI | 109897483 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTGTGC AGTTATGGTC GGTAAAAGAT GAAGTGAAGC GTGATTTCGA AGGAACCCTC
ACTATATTGG CTGACATGGG CTTTGATGGT GTTGAGTTCG CAGGCGACTT TGGTAAATAT
GAGCAAAACC CGAAAGCACT GAAAGCATTT CTTGATGGAC TGGGTTTAAA AGTCAGCGGC
GCGCATATTC CGTTTGAAAA ACTAGACGAA CAGCAATTTG CTGACACAGT GGCGTTTTAT
AAAGCTATTG GCTGCGATAG CTTGATAGTA CCTTACGACG CTCGAGCGTT TGACGCTCAG
CAGGTTAACG CTGTCGTAGC AGATTTGAAT CGGTTGTCTG ATAAGCTAGC GCCAGAGGGC
ATAAAGATTG GTTATCACAA TCACGAAAAA GAGTTTGATG ACTACCAGCA AAGTACCTAT
TGGGATTACA TTGCGCAAAA CACCCATAAA AACGTCATTT TGCAGCAAGA TGTGGGCTGG
ACGACCTATG CTGGTAAAGA TCCCGTTGAA TATGTTAAGC GCTACCCTGG CCGCACTTTT
ACCACTCATT ACAAGGTCAA ACTACCGGAT GATGCAAAGG GGAAGCTGCC GTTAATTGGT
CAAGACACCA TAAACTGGCC GAATCTGATT GACGCCAATA TGACCGTTGG CGGAACACAC
TGGCTTGTGG TTGAGCAAGA AGAATATCCT AACGATTTAA GACCGCTAGA AGCGGTTAAA
ATATCGAAGC AGGGCTTAGC GGAGTTTCTT GACGCGCGCT AG
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| Protein sequence | MSVQLWSVKD EVKRDFEGTL TILADMGFDG VEFAGDFGKY EQNPKALKAF LDGLGLKVSG
AHIPFEKLDE QQFADTVAFY KAIGCDSLIV PYDARAFDAQ QVNAVVADLN RLSDKLAPEG
IKIGYHNHEK EFDDYQQSTY WDYIAQNTHK NVILQQDVGW TTYAGKDPVE YVKRYPGRTF
TTHYKVKLPD DAKGKLPLIG QDTINWPNLI DANMTVGGTH WLVVEQEEYP NDLRPLEAVK
ISKQGLAEFL DAR
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