| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1155 |
|---|
| Symbol | |
|---|
| ID | 4173206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1396388 |
|---|
| End bp | 1396801 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638054162 |
|---|
| Product | redoxin |
|---|
| Protein accession | YP_660735 |
|---|
| Protein GI | 109897480 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCTA ACTGGAGCCT ACAAGATGCC GACGGTAATC AAGTGTCTTC AACAGATTTT
GCAGGTAAAC CACTGATTAT TCACTTCTGG GCGACGTGGT GCCCGTACTG CAAAAAGTTG
CAGCCTGGGC TAGAGCGCCT CTATGTGAAA TACCAACAAC AGGGCCTACA GATGATCGCT
ATTAGCTTGC GAGAAGATGA AGACGCCAAG CCACAAGAAG CGCTGAATGC ACGAGGTATG
ACGTTTAAAA CGTTAGTCAA TGGCGACCAA GTTGCCATGG ATAAATTCTA TGTGCGAGGT
ACGCCAACTA CCTTTTTTAT TAATGCAAAA GGGCAAGTGG TGGTGGCGAC TCAATTGTCT
GATCCTCATG ATCCGCGCTT GGAGCAAGTA GTGAAATCTA TCTTGGTTAA ATAA
|
|---|
| Protein sequence | MAPNWSLQDA DGNQVSSTDF AGKPLIIHFW ATWCPYCKKL QPGLERLYVK YQQQGLQMIA
ISLREDEDAK PQEALNARGM TFKTLVNGDQ VAMDKFYVRG TPTTFFINAK GQVVVATQLS
DPHDPRLEQV VKSILVK
|
|---|
| |