| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1149 |
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| Symbol | |
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| ID | 4173200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1390989 |
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| End bp | 1391708 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054156 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_660729 |
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| Protein GI | 109897474 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCGAT GTGTGGTAAT AGATGACGAA GCATTAGCCC GTGAGCGAAT TGCTCAATAT
ATTTCCCGTT CTCCGCTTTG TGAGGTCGTA GCAGAAGCAA GTAGCTTTGA AAATGCCAAA
CAGCTGATAC TGGAACAGCA ACCTGATATT TGTTTTTTGG GTATTCAGAT CATCGGTGGC
AGCGGAGTTG AACTAGCAAA AGAGCTGCAC AATAGTGTTT CGTGTCATTG GGTGTTTACC
ACGGCCCATA GCGAATATGC TATAGCCGCA TTTGAGTTAG AGGCAACCGA CTATTTATTG
AAGCCCTTTC AAGATAGCCG CCTGGCGCAA GTGATTGCGA AAATTCATAG AAAACACCAG
TCGATTACAC CGAAATACGA AACTCGGCGT CAACTGCCTA TTAGATCCGT AGGCAGCGTC
AAATTCATTA ATACCCAAGA TATTATTTGG GTGAAGGGCT CGGCAAATTA TGTTGAATTA
TATTGCGAAG GGAAAATGCA TTTGCACCGG GAAACCCTAT CAGCACTTGC GCAGACACTC
GATCCTACCC AGTTTATCCG AGTTCATCGT AGTGCTATCG TTAATATAGA TTATGTCCAT
TCTCTGAACA GTGAATTAGG TCGTTTCTCT TTACTTCAAT TAGATAATGG CGATGAGGTC
AAAATCGGCC AATCATATAA GGCGCAATTA CTTTCTGCGT TGGGCGTCGA TGCCGAATAG
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| Protein sequence | MYRCVVIDDE ALARERIAQY ISRSPLCEVV AEASSFENAK QLILEQQPDI CFLGIQIIGG
SGVELAKELH NSVSCHWVFT TAHSEYAIAA FELEATDYLL KPFQDSRLAQ VIAKIHRKHQ
SITPKYETRR QLPIRSVGSV KFINTQDIIW VKGSANYVEL YCEGKMHLHR ETLSALAQTL
DPTQFIRVHR SAIVNIDYVH SLNSELGRFS LLQLDNGDEV KIGQSYKAQL LSALGVDAE
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