| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1148 |
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| Symbol | |
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| ID | 4173199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1387527 |
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| End bp | 1390550 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054155 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_660728 |
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| Protein GI | 109897473 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAG TATCATTTAG ACGAAGTATT ACTGCTCTTG CGGTAGCGGC GTCACTTGGT
TTTGCATTAC CTGCATTAGC GGATAACACA ACAGCAAATA TCTCGGGTTC AATTAACGCA
AACGATTATT CAGCATACAC CGTTATCGCG AAAGACCCGG CCACTGGATT AGAGCGCGTT
ATCTCGGTGA GCGACGAAGG AAGTTTCCGC TTCGCTAAAT TACCTACTGG CGTATACGAC
ATCACCGTTA AGAAAGGTGA CGCTGTTGTT GCGGAGCAAA AAACGCGTAT TAGCTTGGGC
TCAAACACCT CTTTAGCATT TGATTTTATC GATAACGATG GTACCGAGCG CATTGAAGTG
ACCGGGGCAA GAATTTCAGC AATCGATTTA AGCTCCACTG ACTCTGGATT AGTCATTGAT
GAAGTCGAGT TGGACAGAAT GCCTGTTTCT CGTAATATTA CGGCAGTCGC TTTACTTGCC
CCTGGAACAG TCATGGGCGA TTCAAGCTTC AGCTCACCTA ACTCAGGCGG CACTGCGTCT
TTCGGTGGCG CTTCAGTAGC TGAAAACTCT TGTTATATTA ATGGCATGGA AGTTACAAAC
ACCAGCCAAG GCTTGGGCTG CGGTACAGTT CCCTTTGAGT TTTATAAAGA GTTTCAAGTT
AAAACCGGTG GATATTCTGC TCAATTCGGC AGAACAACGG GCGGCGTATT AAATGCGGTG
ACTAAAAGTG GTTCAAACGA ATGGGAATTT GCTGCCACTG CTTTGTTTAC CCCTAAATCG
CTTCGCGAAG ATGGTCAAAT TTCATACTCA GCAGGTGGCG CGGGTGGTCC TGTCGTATTC
CGTAATCAGA CCCAAGACGA GTACAGTAAA ACCGAATTCG CCTTGTCAGC ATCAGGTGCT
TTAATCGAAG ACACCTTGTT TTTCTACGCA CTCGTTAACC CACGTGATGT TGAAAATAAC
TTTGCATCCC AGTCAAGTGG AACACAGCAA TACGCAGTGG ACGACAACTA CATAAAACGT
GACTCAAGCG GCTCAGACAA TTTGTTCTGG GGAGCAAAAG TTGATTGGTT TATCAACGAT
GATCACAAGA TCAGCCTATT TGGTTACTCA AATAAAAGCG ACACAGAGTC TACGGCTTAT
GAGTTCGATC GCAGTACTGG GGAAATCGGG GATGCTTTGC AAACAACGAT TCGTGAACGA
GGCGGTGATC TTAAAAGTAT TAGCTACACA GGTAATTTCA CCGATGAGTT AACCGTATCT
GCCATGTACG GTGAAATTGA AACTGATTAC ACTAATACGC CTAGTAACTT GGACTGCCCA
ACAGTACTAG ACACAAGAAA CGTGTCTGAT AGCCAAAAGA TCACAAGTTG TGGTTCAGGT
GGTTCGACGG GGGTGAATCA AGATAAGAAT AAGCAAACGC GTATTGATAT TGAATATGCA
TTTGAAGATC ACCTAGTACG AGTGGGCTAC GATAAGCAAG AACGTGAAAC CTTCCACACT
TCTGCCCCCA TTACAGGTCA TAGTTGGACA TACTCGTCAG TTAATCCAAA CGGTGTTATT
ACTGGTAATG ATGGCCCCTT ATTTACTAAC ACGACGGGCG CTGCAATTGA TGTCGTCGCG
GATCGCATAT TCGCGGGTGG TGGCGGCTTC AGCACAGATT TGAACGCTTG GTACATCGAA
GATGAATGGC AAGTAACAGA AGATTTGATG CTGTCACTGG GCCTTCGTCG CGATGAATTT
GAAAACTCTG GTGTTACTGG CAAAGTTTTC TCTTCATTTA AAACCGATGT TGCTCCGCGC
TTAGGTTTCA GTTGGGATCC TACTGGAGAG GGCGACTCTA AAGTATACGG TACCTATGGT
ACATACTACC TACCAGTGCC TAATAACACG AACTACCGAG CAGCCTCAGG TGTAAGTGAC
ACAACCACTT ATTATACCTT CACTGGTTCA GATGCAACGG GGGCACCTAC AGGTACTTCG
CCCGTTTCTG GAACAGTTGC TGATTCGCAA ATTGTTAATT CTGTTCCTAA CCCTGCAACG
AAAGAGACGT TCCAAGCGGA AGAAGCGGAA CCCTTTAGTA AAGATGAGTA TATCGTGGGA
TATGAAACAG CCATTAACGA TGAGTTTTCA TTCTCAGTTC GCGCTATCTA TCGTGAAGTT
GCCACTGCAT TAGATGATTA TTGTGGTCCA TTCGCGTCGC AAGCTACGTG TACTTTGCTC
AACCCAGGTA ATGATTCAAC GTGGCAGCTG GATAATGACT TTGACAGTAT CGTTGACACC
GGAAGTCGCA GAACTTACAC AGCTGAAGAA ATCGGATTGC CTGAAGCCGT CAACGAATAT
ACCGCTTTAC AACCTCAGAT TAATTATCGC GGTGATAGCA TGCGTATGTC ACTAATATAT
ACTTGGAGTC GTAGTGTAGG GAATTTTGAA GGTGCGGTTA AATCCGATAT TGGCCAAGCT
GATGCGGGTA TTACTCAAGA CTTCGATTTT CCTGCTTTGC AAGACGGTTC TGATGGGTAT
CAAGCCAATG ACCGACGTCA CGTATTTAAA TTCTTTGGCT CATATGACGT GACTGAAGAT
TTAACCGTGG GCTTTAACTC AACCCTTTCT AGTGGTCGTC CTCTAAGTGC ATTCGGTCAA
GGGTATCCAT CTGATGATCC GGCTATCTAT GGAAGCTACG GTGATACATT CTACCTATAC
ACCAATGAGT GCCCAGACGC CAATGGCAAT GGTACGTGTG AACAAAGTGA GAAAATTTAT
CAGTACAGCC CCCGTGGTTC AAAAGGGCGT ACCCCTTGGA CATTCAACCT TGATTTGTCA
GCAAACTACA ACTTTACCTT TAGTGATGTA GATATGCGCG CCACATTGAA CGTTTACAAT
GTGTTAAATG GTCAAGCCGT GACATCGCAA AATGAGCATT ATGAGAATAG ACGTTCTGAA
GGTTCATTTA ATCAATACTA TGGTGCTGCA TATACATGGC AATCGCCTCG TTATGTTGAA
CTAGGATTCG AAGCTCGCTT TTAG
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| Protein sequence | MKQVSFRRSI TALAVAASLG FALPALADNT TANISGSINA NDYSAYTVIA KDPATGLERV
ISVSDEGSFR FAKLPTGVYD ITVKKGDAVV AEQKTRISLG SNTSLAFDFI DNDGTERIEV
TGARISAIDL SSTDSGLVID EVELDRMPVS RNITAVALLA PGTVMGDSSF SSPNSGGTAS
FGGASVAENS CYINGMEVTN TSQGLGCGTV PFEFYKEFQV KTGGYSAQFG RTTGGVLNAV
TKSGSNEWEF AATALFTPKS LREDGQISYS AGGAGGPVVF RNQTQDEYSK TEFALSASGA
LIEDTLFFYA LVNPRDVENN FASQSSGTQQ YAVDDNYIKR DSSGSDNLFW GAKVDWFIND
DHKISLFGYS NKSDTESTAY EFDRSTGEIG DALQTTIRER GGDLKSISYT GNFTDELTVS
AMYGEIETDY TNTPSNLDCP TVLDTRNVSD SQKITSCGSG GSTGVNQDKN KQTRIDIEYA
FEDHLVRVGY DKQERETFHT SAPITGHSWT YSSVNPNGVI TGNDGPLFTN TTGAAIDVVA
DRIFAGGGGF STDLNAWYIE DEWQVTEDLM LSLGLRRDEF ENSGVTGKVF SSFKTDVAPR
LGFSWDPTGE GDSKVYGTYG TYYLPVPNNT NYRAASGVSD TTTYYTFTGS DATGAPTGTS
PVSGTVADSQ IVNSVPNPAT KETFQAEEAE PFSKDEYIVG YETAINDEFS FSVRAIYREV
ATALDDYCGP FASQATCTLL NPGNDSTWQL DNDFDSIVDT GSRRTYTAEE IGLPEAVNEY
TALQPQINYR GDSMRMSLIY TWSRSVGNFE GAVKSDIGQA DAGITQDFDF PALQDGSDGY
QANDRRHVFK FFGSYDVTED LTVGFNSTLS SGRPLSAFGQ GYPSDDPAIY GSYGDTFYLY
TNECPDANGN GTCEQSEKIY QYSPRGSKGR TPWTFNLDLS ANYNFTFSDV DMRATLNVYN
VLNGQAVTSQ NEHYENRRSE GSFNQYYGAA YTWQSPRYVE LGFEARF
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