Gene Patl_1146 details

Gene Information

• Locus tag: Patl_1146
• ID: 4173197
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 1386000
• End bp: 1386665
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638054153
• Product: hypothetical protein
• Protein accession: YP_660726
• Protein GI: 109897471

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATCT GCCAGCAACA TCAACAAAGA AGCTATGCTC AAATTCGTGA AAAAATGCAA 
CCTGGCGACA TCATCGCCTT TGGCGGCAAT AGTCTTTTTT CCAAATGGGC AAAGCTCACT 
ACCCGTTCTG TGGTTACCCA CGTTGCAGTT GTTATCAAAA CTCAGATTTT GGATGAAGGT 
AGTGGCCGGT ATTTCAACCA AGCCATCGAA GCTACCAGTT ATAACGGAAA ATGCGGCGTC 
ATGCTTACTC GATTGAGTGA GCGTGTTGCC ACCTACGATG GCGACATGTG GTGGCTTCCT 
TTAGGTGATA AGGCTCGTGC CAATCTAGAG AAGAATAAAA ATGCTTTCTT CGACTTTTTA 
TTTCAACAAA ATCATAAACC CTACGACATA TGGCAACTAT TTGGCTCTAC TGTTGATGCA 
ACAGATTCCA TTCCCCTGCT TAAAGAAATG AGTTTAAACT CAGAAGACTT TTCCAGCTGG 
TTTTGTTCGG AGTTGGTAGC CGAAGCCATG GAAAGAGGAA AAATCATCGG TAGTGTTAAT 
GCATCCGAGG TCACCCCAAT TGATGTCTGT CGCTTTAATG TATTCGACGA GCAGTACGTA 
CAATTCAGAG GGGAATCGAA AACAATTACC GGCTACAACT CTCTGCCGTT CGATACATGG 
CAGTAG 

 

Protein sequence

MTICQQHQQR SYAQIREKMQ PGDIIAFGGN SLFSKWAKLT TRSVVTHVAV VIKTQILDEG 
SGRYFNQAIE ATSYNGKCGV MLTRLSERVA TYDGDMWWLP LGDKARANLE KNKNAFFDFL 
FQQNHKPYDI WQLFGSTVDA TDSIPLLKEM SLNSEDFSSW FCSELVAEAM ERGKIIGSVN 
ASEVTPIDVC RFNVFDEQYV QFRGESKTIT GYNSLPFDTW Q