Gene Patl_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1138 
Symbol 
ID4173187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1375966 
End bp1376775 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content46% 
IMG OID638054144 
Productcobalamin 5'-phosphate synthase 
Protein accessionYP_660718 
Protein GI109897463 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGAT TTTTAAACTA TCAGTTCAAT TTAATACTAT TAGCAGTGAG TTTTTTCACC 
CGCTTACCTG TGCCGACTGC AATTGATTAC AGCCCACAAA AATTGCACCA AGCGGGACGA
TATTTCCCAT TAGTTGGCTG GCTGCTGGCT GCTTTATTAA GCGCATTTTA CTGCTTCATG
CTGCCCTATT TAGGACGAGA ACCGACAGTA TGCTTGCTTA TTATATTTAG TTTAATGCTA
ACGGGTGCAA TACATGAAGA TGGCCTAGCA GATACGGCCG ACGGTTTTTG GGGGGGTCAG
AGTATCACGC GCAAGTTGAC CATCATGAAA GACAGCCAAA TTGGCACATA CGGCACGTGC
GCACTGATTT GTGCGCTATT GAGCAAGTTT ATACTGCTGA GCTCGCTAGC CGCGGATCAG
CACCTACTGC TGGCCCTAGC CATTGCCTAC CCTTTGTCTC GCGGGTTGGC TATTTCGCAT
GTGCAACACC TCGCCTATGC ACGCAAAAAT AGTGATAACA GTAAAAGTGA CTCGTTAGCA
CAGCCTATGC AACCTCGGGT GTTACTTTGG CTGCTCGCCT CAAGTGTACC TGCGGTACTA
TGGTTACCAC TATCCAGTGC AATACTCGTC ATAGTCAGTG CATGTGTGCT GCGCTTTGCC
CTTAAACATT GGTTTAAAAA GCACATTGAT GGCTATACAG GGGACTGCTT AGGCTTTGCT
CAACAAACCC AAGAGTTACT CATCTATCTT CTGTTGATTA TCACGTTACC TAAAACAGTG
AATGAGCAGA CCATAGGCTT TCTTTTATGA
 
Protein sequence
MTRFLNYQFN LILLAVSFFT RLPVPTAIDY SPQKLHQAGR YFPLVGWLLA ALLSAFYCFM 
LPYLGREPTV CLLIIFSLML TGAIHEDGLA DTADGFWGGQ SITRKLTIMK DSQIGTYGTC
ALICALLSKF ILLSSLAADQ HLLLALAIAY PLSRGLAISH VQHLAYARKN SDNSKSDSLA
QPMQPRVLLW LLASSVPAVL WLPLSSAILV IVSACVLRFA LKHWFKKHID GYTGDCLGFA
QQTQELLIYL LLIITLPKTV NEQTIGFLL