Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1138 |
Symbol | |
ID | 4173187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1375966 |
End bp | 1376775 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054144 |
Product | cobalamin 5'-phosphate synthase |
Protein accession | YP_660718 |
Protein GI | 109897463 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCGAT TTTTAAACTA TCAGTTCAAT TTAATACTAT TAGCAGTGAG TTTTTTCACC CGCTTACCTG TGCCGACTGC AATTGATTAC AGCCCACAAA AATTGCACCA AGCGGGACGA TATTTCCCAT TAGTTGGCTG GCTGCTGGCT GCTTTATTAA GCGCATTTTA CTGCTTCATG CTGCCCTATT TAGGACGAGA ACCGACAGTA TGCTTGCTTA TTATATTTAG TTTAATGCTA ACGGGTGCAA TACATGAAGA TGGCCTAGCA GATACGGCCG ACGGTTTTTG GGGGGGTCAG AGTATCACGC GCAAGTTGAC CATCATGAAA GACAGCCAAA TTGGCACATA CGGCACGTGC GCACTGATTT GTGCGCTATT GAGCAAGTTT ATACTGCTGA GCTCGCTAGC CGCGGATCAG CACCTACTGC TGGCCCTAGC CATTGCCTAC CCTTTGTCTC GCGGGTTGGC TATTTCGCAT GTGCAACACC TCGCCTATGC ACGCAAAAAT AGTGATAACA GTAAAAGTGA CTCGTTAGCA CAGCCTATGC AACCTCGGGT GTTACTTTGG CTGCTCGCCT CAAGTGTACC TGCGGTACTA TGGTTACCAC TATCCAGTGC AATACTCGTC ATAGTCAGTG CATGTGTGCT GCGCTTTGCC CTTAAACATT GGTTTAAAAA GCACATTGAT GGCTATACAG GGGACTGCTT AGGCTTTGCT CAACAAACCC AAGAGTTACT CATCTATCTT CTGTTGATTA TCACGTTACC TAAAACAGTG AATGAGCAGA CCATAGGCTT TCTTTTATGA
|
Protein sequence | MTRFLNYQFN LILLAVSFFT RLPVPTAIDY SPQKLHQAGR YFPLVGWLLA ALLSAFYCFM LPYLGREPTV CLLIIFSLML TGAIHEDGLA DTADGFWGGQ SITRKLTIMK DSQIGTYGTC ALICALLSKF ILLSSLAADQ HLLLALAIAY PLSRGLAISH VQHLAYARKN SDNSKSDSLA QPMQPRVLLW LLASSVPAVL WLPLSSAILV IVSACVLRFA LKHWFKKHID GYTGDCLGFA QQTQELLIYL LLIITLPKTV NEQTIGFLL
|
| |