| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1135 |
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| Symbol | |
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| ID | 4173184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1372976 |
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| End bp | 1374580 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054141 |
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| Product | cobyric acid synthase CobQ |
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| Protein accession | YP_660715 |
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| Protein GI | 109897460 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTA AATGCATGAC CTATAAAAGC ATGATCGTTA AAAGCACAGC CTTTGAAAGC
ACAGCCGCTA AAAGCATGAG CGCTAAAAGC GCGACCATCA TGATCCAAGG CACTACGTCA
GATGCAGGTA AAAGCATGCT CGTGGCAGGG TTTTGTCGCT GCCTGAAAAA CAGCGGCGTT
CGGGTGGCTC CCTTTAAGCC ACAAAATATG GCCCTCAATA GCGCTGTTAC TAAAGGTGGC
GGTGAAATAG GCCGTGCGCA AGCGGTACAA GCACAAGCGG CCGGCGTTGA GCCCAGCGTC
CACATGAACC CAGTGTTACT CAAGCCAAGC TCAGATACCG GCGCACAGGT GATCATTCAG
GGTAAAGCGG TGTCAGACAT GCAAGCCAAG AAATACCATG ACTACAAAAA AGTCGCTATG
CAAGCCGTCC TCAGTTCCCA TCAATGCTTA ACGCAAGAGT ACGACGTGAT TGTGGTAGAA
GGCGCAGGCA GCCCAGCGGA GATTAATTTA CGCAAAGGCG ACATCGCCAA TATGGGCTTT
GCCGAAGCGG TTGATTGCCC AGTGATCATA GTGGCAGATA TCGATCGCGG CGGCGTATTC
GCGCAACTTG TTGGTACATT AGATTTACTG TCAGAATCTG AACAAAACCG CGTGGTCGGC
TTTGTCATTA ACAAGTTTCG TGGTGACATC AAACTACTCG AGTCAGGTTT AACCTGGTTA
GAAGACCGAA CGAAAAAACC GGTGTTAGGT GTACTGCCCT ATATTCACAA CTTACAATTG
GCCGCTGAAG ACGCTATTCA AGCAGAACAG AATTTAGATG AAACAAACAT ACGAATACAC
ATATGTGTTC CTGTGTTTAA ACGCATCAGT AATCACACCG ATTTCGATAT GCTGCGCGTA
CACCCCCAAG TAAAACTGAC CTTTGTGGCC CAAGGCCGCC CTATTCCAGC CTGTGATTTG
ATCATATTAC CGGGTAGCAA GAATGTGCGT GCCGACCTAG CATTGCTAAA AAAGATGCGA
TGGGACGCAG GCTTACAACG TCACCTACGC TACTCCGGTA AAGTATTAGG TATTTGCGGT
GGCTATCAAA TGTTGGGCCA AAGTATTTCG GATCCCAGCG GCGTTGAAGA TACGCCAGGC
ACCAGCGAAG GCTTAGGTTA TTTGCCTATC ACCACGCAAT TACAAGCACA AAAACAACTT
ACCCAAAGTC ACGGAGACTT ATTAATCCAT GAAAATGGCA GCGCACCTAT TCGAGGCTAC
GAAATTCACA TAGGCACTAG CGTGCGAGCT GATAATGCCA AGCCGATGAT CTTATTAAAC
AACGGCGAGT ATGAAGGCTG TATCAGTGAA GACAACCAAG TTGCGGGTAG TTATTTACAC
GGCCTGTTCG ATTCACCACA GGCTTTGCAG CATATACTTG CTTGGGCAGG TGCCAATACA
GAACTCGCCG AGGATTACGG GGCGCAACAA GAGCGCGAAA TAGAGCGCTT AGCTCAGGTG
TGCCAAGGGC ATCTCAACTG GGATGCCATT CACACCATTA TCGAACAACA ATTTACCGCG
CCGTCTTTTT CCAGCGCGGC CACCCACAGC AAAGAGGGAG CATAA
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| Protein sequence | MTSKCMTYKS MIVKSTAFES TAAKSMSAKS ATIMIQGTTS DAGKSMLVAG FCRCLKNSGV
RVAPFKPQNM ALNSAVTKGG GEIGRAQAVQ AQAAGVEPSV HMNPVLLKPS SDTGAQVIIQ
GKAVSDMQAK KYHDYKKVAM QAVLSSHQCL TQEYDVIVVE GAGSPAEINL RKGDIANMGF
AEAVDCPVII VADIDRGGVF AQLVGTLDLL SESEQNRVVG FVINKFRGDI KLLESGLTWL
EDRTKKPVLG VLPYIHNLQL AAEDAIQAEQ NLDETNIRIH ICVPVFKRIS NHTDFDMLRV
HPQVKLTFVA QGRPIPACDL IILPGSKNVR ADLALLKKMR WDAGLQRHLR YSGKVLGICG
GYQMLGQSIS DPSGVEDTPG TSEGLGYLPI TTQLQAQKQL TQSHGDLLIH ENGSAPIRGY
EIHIGTSVRA DNAKPMILLN NGEYEGCISE DNQVAGSYLH GLFDSPQALQ HILAWAGANT
ELAEDYGAQQ EREIERLAQV CQGHLNWDAI HTIIEQQFTA PSFSSAATHS KEGA
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