Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1135 |
Symbol | |
ID | 4173184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1372976 |
End bp | 1374580 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638054141 |
Product | cobyric acid synthase CobQ |
Protein accession | YP_660715 |
Protein GI | 109897460 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCTA AATGCATGAC CTATAAAAGC ATGATCGTTA AAAGCACAGC CTTTGAAAGC ACAGCCGCTA AAAGCATGAG CGCTAAAAGC GCGACCATCA TGATCCAAGG CACTACGTCA GATGCAGGTA AAAGCATGCT CGTGGCAGGG TTTTGTCGCT GCCTGAAAAA CAGCGGCGTT CGGGTGGCTC CCTTTAAGCC ACAAAATATG GCCCTCAATA GCGCTGTTAC TAAAGGTGGC GGTGAAATAG GCCGTGCGCA AGCGGTACAA GCACAAGCGG CCGGCGTTGA GCCCAGCGTC CACATGAACC CAGTGTTACT CAAGCCAAGC TCAGATACCG GCGCACAGGT GATCATTCAG GGTAAAGCGG TGTCAGACAT GCAAGCCAAG AAATACCATG ACTACAAAAA AGTCGCTATG CAAGCCGTCC TCAGTTCCCA TCAATGCTTA ACGCAAGAGT ACGACGTGAT TGTGGTAGAA GGCGCAGGCA GCCCAGCGGA GATTAATTTA CGCAAAGGCG ACATCGCCAA TATGGGCTTT GCCGAAGCGG TTGATTGCCC AGTGATCATA GTGGCAGATA TCGATCGCGG CGGCGTATTC GCGCAACTTG TTGGTACATT AGATTTACTG TCAGAATCTG AACAAAACCG CGTGGTCGGC TTTGTCATTA ACAAGTTTCG TGGTGACATC AAACTACTCG AGTCAGGTTT AACCTGGTTA GAAGACCGAA CGAAAAAACC GGTGTTAGGT GTACTGCCCT ATATTCACAA CTTACAATTG GCCGCTGAAG ACGCTATTCA AGCAGAACAG AATTTAGATG AAACAAACAT ACGAATACAC ATATGTGTTC CTGTGTTTAA ACGCATCAGT AATCACACCG ATTTCGATAT GCTGCGCGTA CACCCCCAAG TAAAACTGAC CTTTGTGGCC CAAGGCCGCC CTATTCCAGC CTGTGATTTG ATCATATTAC CGGGTAGCAA GAATGTGCGT GCCGACCTAG CATTGCTAAA AAAGATGCGA TGGGACGCAG GCTTACAACG TCACCTACGC TACTCCGGTA AAGTATTAGG TATTTGCGGT GGCTATCAAA TGTTGGGCCA AAGTATTTCG GATCCCAGCG GCGTTGAAGA TACGCCAGGC ACCAGCGAAG GCTTAGGTTA TTTGCCTATC ACCACGCAAT TACAAGCACA AAAACAACTT ACCCAAAGTC ACGGAGACTT ATTAATCCAT GAAAATGGCA GCGCACCTAT TCGAGGCTAC GAAATTCACA TAGGCACTAG CGTGCGAGCT GATAATGCCA AGCCGATGAT CTTATTAAAC AACGGCGAGT ATGAAGGCTG TATCAGTGAA GACAACCAAG TTGCGGGTAG TTATTTACAC GGCCTGTTCG ATTCACCACA GGCTTTGCAG CATATACTTG CTTGGGCAGG TGCCAATACA GAACTCGCCG AGGATTACGG GGCGCAACAA GAGCGCGAAA TAGAGCGCTT AGCTCAGGTG TGCCAAGGGC ATCTCAACTG GGATGCCATT CACACCATTA TCGAACAACA ATTTACCGCG CCGTCTTTTT CCAGCGCGGC CACCCACAGC AAAGAGGGAG CATAA
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Protein sequence | MTSKCMTYKS MIVKSTAFES TAAKSMSAKS ATIMIQGTTS DAGKSMLVAG FCRCLKNSGV RVAPFKPQNM ALNSAVTKGG GEIGRAQAVQ AQAAGVEPSV HMNPVLLKPS SDTGAQVIIQ GKAVSDMQAK KYHDYKKVAM QAVLSSHQCL TQEYDVIVVE GAGSPAEINL RKGDIANMGF AEAVDCPVII VADIDRGGVF AQLVGTLDLL SESEQNRVVG FVINKFRGDI KLLESGLTWL EDRTKKPVLG VLPYIHNLQL AAEDAIQAEQ NLDETNIRIH ICVPVFKRIS NHTDFDMLRV HPQVKLTFVA QGRPIPACDL IILPGSKNVR ADLALLKKMR WDAGLQRHLR YSGKVLGICG GYQMLGQSIS DPSGVEDTPG TSEGLGYLPI TTQLQAQKQL TQSHGDLLIH ENGSAPIRGY EIHIGTSVRA DNAKPMILLN NGEYEGCISE DNQVAGSYLH GLFDSPQALQ HILAWAGANT ELAEDYGAQQ EREIERLAQV CQGHLNWDAI HTIIEQQFTA PSFSSAATHS KEGA
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