| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1130 |
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| Symbol | |
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| ID | 4172305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1368280 |
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| End bp | 1369332 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054136 |
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| Product | aminotransferase, class I and II |
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| Protein accession | YP_660710 |
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| Protein GI | 109897455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGGCG GGCAATTAAG CACCATGGCC CAGCGTTACC ACATAGAGGA AAAAGACTGG
CTTGATTTAT CCACCGGCAT TGCGCCTATC GCTTATCCTG TTGGCATAAT TCCCACCGCC
TGCTGGCAAC GTTTACCACA AAATAACGAA GGGCTATTAC ACGCCGCACG TGGCTACTAT
CAAACCCACC ATTTGCTGCC AACACCTGGC AGCCAAAGCA TCATTCAAAT GCTACCGCAA
CTTTGCCGCG CCCGAGGCTT TGCTAGCAGC AGGGTATGGC TGCCAAAAGT AGGCTATCAA
GAACATCGCA AAGCATGGCA AAAAGACCAG TATCAAACTC TCGATTACAC TGACGTTACT
GAGTTAGGCC AAATAGGGCA CAAGGATATT GTGCTATTGA TCAATCCAAA TAATCCTACG
GGTGAACATT ATCCAAAGGC GTACGTCGAC CAATTACACA AAGACATTCA TGCCAAACAA
GGGCTTCTGA TCATTGACGA AGCCTTTATG GATGCAACAC CGGAAGAATC CATGGTGCAA
GCATTTAGGC GACTTAATAG CGCAACTCCG CAGCAGGCAG GCACTAAGCA CCAAGACTAC
AGCGACGCCT TGATTATATT ACGCTCAGTG GGCAAGTTTT TCGGGTTAGC AGGTATCCGC
TTAGGGTTCG TACTGGCAAA TGAAACTTGG CTTAATGCAA TGGCCTTATC ATTAGGCCCT
TGGGCGGTAA GCGGCCCCGC GCTTTTCGTT GGCGAACAGG CACTAGCAGA TAAACGCTGG
CAAGAAGAAC AAAGGGTTGT ACTCTGGCGT TTAAGTAGCG CATTACAAAG CACATTGAAA
CAACTATTCA CACAACCTGT GCATGGCACG TTGCTATTCA AAACGGTTCA CACACCCAAC
GCCCCCGCAA TTTTTGACGC TTTATGCCAG CAAGGGATTT ACGTGCGCTT ATGCGACGAA
AAAGACGCCC TACGATTTGG TATTGCGAAC GAACAGGGCC TGATAAGGTT AAAAGACGCA
TTACACACAT CGCCGATTCA GCGACTCTTG TAA
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| Protein sequence | MHGGQLSTMA QRYHIEEKDW LDLSTGIAPI AYPVGIIPTA CWQRLPQNNE GLLHAARGYY
QTHHLLPTPG SQSIIQMLPQ LCRARGFASS RVWLPKVGYQ EHRKAWQKDQ YQTLDYTDVT
ELGQIGHKDI VLLINPNNPT GEHYPKAYVD QLHKDIHAKQ GLLIIDEAFM DATPEESMVQ
AFRRLNSATP QQAGTKHQDY SDALIILRSV GKFFGLAGIR LGFVLANETW LNAMALSLGP
WAVSGPALFV GEQALADKRW QEEQRVVLWR LSSALQSTLK QLFTQPVHGT LLFKTVHTPN
APAIFDALCQ QGIYVRLCDE KDALRFGIAN EQGLIRLKDA LHTSPIQRLL
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