| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1123 |
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| Symbol | |
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| ID | 4172298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1360350 |
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| End bp | 1361663 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054129 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_660703 |
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| Protein GI | 109897448 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTAT TAAACGAAAC CCATGATATT AAATTGACCA GCTGGGTAAG CTCGGCTAAC
CGAGACGGTG ACTTTCCTAT TCAGAATTTG CCTTTTGCCA CGTTTCGCCG AAAAAATAGC
GACGAACGCG TTCGAGGCGG TGTCGCTATT GGTAAATACG TCATTGATAT GGCTGCACTC
GCTCAAGCAA GCAATTTTAC CGGCCTTGCA CTAAAAGCAG CTAAAGCCGC CGCCCAAACG
AGCTTGAACG AATTAATGGA CATGGGTAAA GAAGCGAACT CCGCTTTGCG CCTAGCGCTG
TCTCGCGCAC TTCGCACCGA GGCCCGTGAA CAAGAATGGT TGCGCGACTG CTTAATTTTA
CAAAGCGATA TTGAGTATGC AATGCCTTGC ACAATCGGTG ATTACACTGA TTTTTATACT
TCAATTCACC ATGCTACTGC TGTTGGTTCG CTTTTTCGCC CAGACAACCC CTTGCTACCA
AACTACAAAT GGGTACCGAT TGGCTATCAC GGCAGATCTT CCACCATTGA TATTTCAGGG
CAAGCGTTTC CGCGTCCTGT TGGCCAAATC AAAGCGCCTG ATGCAGAAGC CCCCGTATTA
GCGCCCTGTA AACGACTTGA TTATGAAGTA GAGATGGGTA TTTTCGTCGG CCAAAGCACC
ACCTTGGGCG AGCGAATCGA TATCTCGTGC GCAGAAGATC ACGTTTTCGG TTTATGCTTA
TTCAACGACT GGTCAGCACG CGATATTCAA GCCTGGGAGT ACCAACCACT GGGGCCATTT
CTCGCCAAAA ACTTTGCATC TACCATTTCC CCATGGATTG TCACCATAGA GGCATTAGCC
CCCTACCGAA CCCAATTTGA ACGCCCTGAA AGCGATCCGC AACCACTGCC GTACTTAAGC
AGTAGCGAAA ACGACATGCG AGGGGGATTA AACATTCATT TAGAGTGCCT GATTCAAACT
GAAAAAATGC GTAACAACGA TGAAGATCCA TACAAGATAA GTGATAGTAA TTTTAAGTAC
TCTTATTGGA CGATTGCTCA GCTTGTTGCT CATCACAGTG TAAACGGCTG CACCATGAGA
GCAGGAGACC TACTTGGGTC AGGTACACAG TCAGGGCCTG AGCACGAGCA GGCTGGCTCA
ATGCTAGAGC TATCTAGGGG CGGTAAGGAA GCATTCAAGC TGGGCAATGG GGAAAAGCGT
ACGTTTTTAG AAGACGGCGA CAGCGTAATC ATGCGTGGCT ATTGCCAGAA AGACGGCGCA
GCCCGTATCG GCTTTGGTGA AGTACAAGGC ACTGTGCTGC CGGCAAGTCT TTAA
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| Protein sequence | MTLLNETHDI KLTSWVSSAN RDGDFPIQNL PFATFRRKNS DERVRGGVAI GKYVIDMAAL
AQASNFTGLA LKAAKAAAQT SLNELMDMGK EANSALRLAL SRALRTEARE QEWLRDCLIL
QSDIEYAMPC TIGDYTDFYT SIHHATAVGS LFRPDNPLLP NYKWVPIGYH GRSSTIDISG
QAFPRPVGQI KAPDAEAPVL APCKRLDYEV EMGIFVGQST TLGERIDISC AEDHVFGLCL
FNDWSARDIQ AWEYQPLGPF LAKNFASTIS PWIVTIEALA PYRTQFERPE SDPQPLPYLS
SSENDMRGGL NIHLECLIQT EKMRNNDEDP YKISDSNFKY SYWTIAQLVA HHSVNGCTMR
AGDLLGSGTQ SGPEHEQAGS MLELSRGGKE AFKLGNGEKR TFLEDGDSVI MRGYCQKDGA
ARIGFGEVQG TVLPASL
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