Gene Patl_1108 details

Gene Information

• Locus tag: Patl_1108
• ID: 4173637
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1336224
• End bp: 1336817
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054114
• Product: ankyrin
• Protein accession: YP_660688
• Protein GI: 109897433
• COG category: [R] General function prediction only
• COG ID: [COG0666] FOG: Ankyrin repeat

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0116329
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGCA TCATCCAATT ACCACTAAAA ATTTTAATGA CATGCTGCTT TTTGATATTA 
GCGTCAACAT TAGCCTTTGC GGGCCAAGCA CAGCCTGTTG ATGGCACACA CCTACAAACG 
GTTTACTTTG ATGCAGCACG GCAAGGTGAT ATCCCCACTT TACGTGCGTA TTACACTGCC 
GGGCTAAGCC CAAATGTTGC AGACCAAAAA GGCTACACCG CGCTTATTCT ATCGGCCTAT 
CATGGCAAAA CCGATGCGGT AGAATATTTG TTAGCTCATG CTGATGTAAA TGCTTGTCAA 
GAAGACAACT CAGGAAACAC CGCTTTGATG GGCGCTATCT TCAAGGGGAA TTTCGGAGCG 
ATAAAGGCAC TTATTAGCGC TGATTGCGAT ATTGATCAAG CCAATAGCAA CGGCCAAACC 
GCCGCTATGT TTGCTACGCT TTTCAATCGC ACGGATATTA TCTCAGCGTT AACCGAAGCG 
GGAGCCAATT TAACGGCCAA AGACAGTTCA GGCAATAGCT TGGTGGATAT AGCGTTAAGC 
CAAGGTAATT ATGAATTGGC TGAGGCGTTG ATGGAAAAAA GAACAGCAAA CTAA 

 

Protein sequence

MNRIIQLPLK ILMTCCFLIL ASTLAFAGQA QPVDGTHLQT VYFDAARQGD IPTLRAYYTA 
GLSPNVADQK GYTALILSAY HGKTDAVEYL LAHADVNACQ EDNSGNTALM GAIFKGNFGA 
IKALISADCD IDQANSNGQT AAMFATLFNR TDIISALTEA GANLTAKDSS GNSLVDIALS 
QGNYELAEAL MEKRTAN