| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1107 |
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| Symbol | |
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| ID | 4173636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1334429 |
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| End bp | 1336039 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054113 |
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| Product | catalase |
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| Protein accession | YP_660687 |
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| Protein GI | 109897432 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.610456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA AAGCTTCACT TCTTATTGCG GCTACGCTTT TTAGCGTTGC TACCATGTCC
AGCGCAGAAA CGCTGACTCG CCAAAATGGT GCGCCAGTGG GCGATAACCA AAATTCACAA
ACAGCTGGAC CATGGGGCCC AGTGTTATTG CAAGACAGCC ATTTAATTGA AAAATTAGCT
GCGTTTGACA GAGAGCGCAC ACCAGAGCGC GTAGTGCATG CCCGTGGCAC CGGCGTTCAC
GGCTACTATG AAAACTACGT TGACCTGTCA GACATAACGG TTGCAGCACC GTTTCAAAGC
GAAAACAAGA AAACAGACGT ATTTGTGCGT TTCTCTGCGG TTATCCATGG TCATCAATCT
CCTGAAACCT TGCGCGACCC TCGTGGATTC GCAGTCAAGT TTTACACCGA GCAAGGTAAC
TGGGATTTAG TCGGTAACAA CTTCCCGATT TTCTTTATTC GTGATGCAAT CAAATTCCCA
GATATGGTGC ACAGCCTTAA GCCGTCACCC GTGACGAACA AACAAAGCGC AGCACGTTTG
TTCGACTTTT TCTCTCATGT GCCTGAGTCC ACTCACATGC TAACGCATTT GTTTTCAGAC
ATGGGTACGC CAAAGAGCTA CCTGAATATG GATGGCTCAA GTGTTCATGC CTTTAAATTT
GTGAATGCCA AAGGCCAAGT GAAATATTTC AAACTAACGT GGAAAACCAA GCAAGGTCAG
AAGAACTTTA CGGCCCAAGA AGCGCAAGAA ATGCAAGGTA AAGACTTTCA GCCGATGACG
ACGGATATTT ACACCCGTAT TGGCGAAAAA GGCGAAACCG CTTCTTGGGA TCTGTACTTA
CAAACGATGG AGCCCCAGCA ACTTGATGAC TTCGACTTTA ATCCGTTAGA TACCACTAAA
ATCTGGCCTG AATCGCTTAT ACCAGCCAAG AAAATCGGCA AGTTAACCCT TAACCGTGTG
CCTGATAACT TTTTTGAAGA AACAGAACAA GCCGCGTTTG CACCAAGTAA CTTGATACCC
GGTATTGAGC CATCTGAAGA CAGAATGCTA CAAGGTCGTT TATTCTCTTA TGCTGATACG
CAGCGTTACA GAATCGGCGT AAACGCATAC CGAATTCCGA TTAATGCACC ACGTAATGCT
GCGATCAATA ACCACGAGCA ACACGGTAAA TTGCGCACCA CCAACAGCAC ACGTGATGTG
AATTATCAAC CAAGTCGCCG CGTAGCATTA GATGACGACA ACCAGTACAA ATATGCCCAA
ACGCCTTTGT CGGGAACGAC TCAACAAGCG CCGTTCTACA AACAGCGTAA CTTTGCCCAA
GCCGGTGAGA AATTCCGTTC ATTTAGCAAA GTCGAGCAGC AGCACTTGAT TGAAAACTTA
GGCACAACCT TAGCGGGTGT TCCTGAAGAA GAAATCCGCG TGATTATCAG TGCATATATG
TACAACGCTG ACAAACATTA CGGAACAGGC GTGGCTAAAT TAGCCAGTGC ACCAATAAGC
AAAGTGAAAG CGACCGCCAA GCAATTGATG GACAACCAAG CTGCACTTGA AAAGCGTGCC
AAGAAAGTCG CTGATGATTT CAGCCGTATT TCATACAAGG CTGAGTTGTA A
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| Protein sequence | MKIKASLLIA ATLFSVATMS SAETLTRQNG APVGDNQNSQ TAGPWGPVLL QDSHLIEKLA
AFDRERTPER VVHARGTGVH GYYENYVDLS DITVAAPFQS ENKKTDVFVR FSAVIHGHQS
PETLRDPRGF AVKFYTEQGN WDLVGNNFPI FFIRDAIKFP DMVHSLKPSP VTNKQSAARL
FDFFSHVPES THMLTHLFSD MGTPKSYLNM DGSSVHAFKF VNAKGQVKYF KLTWKTKQGQ
KNFTAQEAQE MQGKDFQPMT TDIYTRIGEK GETASWDLYL QTMEPQQLDD FDFNPLDTTK
IWPESLIPAK KIGKLTLNRV PDNFFEETEQ AAFAPSNLIP GIEPSEDRML QGRLFSYADT
QRYRIGVNAY RIPINAPRNA AINNHEQHGK LRTTNSTRDV NYQPSRRVAL DDDNQYKYAQ
TPLSGTTQQA PFYKQRNFAQ AGEKFRSFSK VEQQHLIENL GTTLAGVPEE EIRVIISAYM
YNADKHYGTG VAKLASAPIS KVKATAKQLM DNQAALEKRA KKVADDFSRI SYKAEL
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