Gene Patl_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1103 
Symbol 
ID4173632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1329011 
End bp1329430 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content41% 
IMG OID638054109 
Producthypothetical protein 
Protein accessionYP_660683 
Protein GI109897428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.883671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAACA GAAGTTTTCC TATTCATGGA AGTTTGTATA TATGCGTAGA ACTAGAGTTA 
ATGATTATTC GTGCTCGCGG CCCAGCTAAC ACTGAAATGG TGTTGCAATA CCAGCGCGAA
ATAAATCAAT ACAGAGAGCA GTTATGTGAC AAACCATGGA CCAGTTTGAC TGTACTGAGT
GGTGAGCCCT TATTGCCACC TGAAGCGGCA GGGATGATGG TTGAATCAAT CAAGCAAGCT
GAGCATATGA ACCTTGTGGC CACAGCAATT GTGTTTGATG ATGTACAATA CAAATCTATA
GCAGAGCAGT TTTGGGAAAG CATATATCAA CGTACTTCCT TAAAATACGC ATTTTTTGAC
GATGAAACAT CCGCTAAAAA ATGGCTGAAA GAAGAATTAA ACGCAGCCCA GTCACAGTAG
 
Protein sequence
MVNRSFPIHG SLYICVELEL MIIRARGPAN TEMVLQYQRE INQYREQLCD KPWTSLTVLS 
GEPLLPPEAA GMMVESIKQA EHMNLVATAI VFDDVQYKSI AEQFWESIYQ RTSLKYAFFD
DETSAKKWLK EELNAAQSQ