Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1099 |
Symbol | |
ID | 4173628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1321970 |
End bp | 1322884 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054105 |
Product | hypothetical protein |
Protein accession | YP_660679 |
Protein GI | 109897424 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGGATTT TAAATCGATA TCGCGGTAAA GCTTTGGATG TTTCTAGCCT TTACTGTTTG CGACTATTAA ACAGCATCAT ACCTAAGCGT TTTGCTTCAC CCTCTATTTT ACTCTTGTCT TACCCCAGAA GCGGCTCCTC CTGGGCCGGT GAGGTGCTGG CCACATCACC GCAGCTCGCG TACCTCAGGG AGCCAATTAC GCAACCCTAT TTAAAACGGT TAGGGGGCGA ACAGGCTGTA TTTACCGCTG AAAAAGACCA TCCGGATTTT GATATATACA AAAAGCTCGC TGACGAGGCG TTCGCTGGCC TACCTCGATA CCACAGAGGC GTAATTCATA ACAAGTGGGA TTTCGTGCCT TTTTTAAAGA ACAACAAGCA AAAATTGCTG CTCAAAGAGG TAAACCCAGC AGCAGCCAGT TTTTACTGTA AACATTATCA CCCTTTCTTA TTTTTACTAT TGCGCCACCC TGCTGCGGTG GCATTGAGTT TTCAGGAAAG AGGGTGGTTG CAAAGGCACA GTGAATTATT AGATGGACAG TCTGAGCTTG ATGTCTGGGG GCGTTTCGGT CAGTTATATG GCACGTTCTT GGCAGAAGCT GTCGACGTGG TGAATCACTA TCCAAATGCA AAGATCATTA AATATGAAGA CTTAGTGGAT GACCCTAAGC AGCAGTTTTC TAACATTTTT ATTGATTGTG GCGTTGACGT ACCAGAAAAT TTTGATTCAA TTATCGAGCA ATATTGTTAT TCCAAAGATG ATCTAAGTAG TGGCTTCCAA ACCGCGAGAA ATTCAAAACT AACAGCTCAG AAGTGGAAAA GTAAGCTCAC GCCTGAGCAA TTAAACGCAT TGCGGGAGGG GTTTTTAGAA ACGTCGTTAA CCTTTTATCG CGATCCCAGT GATTGGCTAA TTTAA
|
Protein sequence | MGILNRYRGK ALDVSSLYCL RLLNSIIPKR FASPSILLLS YPRSGSSWAG EVLATSPQLA YLREPITQPY LKRLGGEQAV FTAEKDHPDF DIYKKLADEA FAGLPRYHRG VIHNKWDFVP FLKNNKQKLL LKEVNPAAAS FYCKHYHPFL FLLLRHPAAV ALSFQERGWL QRHSELLDGQ SELDVWGRFG QLYGTFLAEA VDVVNHYPNA KIIKYEDLVD DPKQQFSNIF IDCGVDVPEN FDSIIEQYCY SKDDLSSGFQ TARNSKLTAQ KWKSKLTPEQ LNALREGFLE TSLTFYRDPS DWLI
|
| |