| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1093 |
|---|
| Symbol | |
|---|
| ID | 4173622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1313415 |
|---|
| End bp | 1314410 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638054099 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_660673 |
|---|
| Protein GI | 109897418 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4763] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTA GTAAAACGAA AGTAAGGGAA AGGCAAGACT GGCTTGACCT AGCAAAAGGC
CTAGGGATTT GCTTGGTCGT TATGTACCAC ACCTGTGAAG GCATTCTGAA TAGTTTTGAG
TATGATACTG AAACGATACA GGCACTAACG AGTTTCTTCA GAAGCTGGTT GATGCCAATG
TTCTTTATGG TGTCAGGGAT TTTGATTAGA AACTCGATCA AAAATAAGCC AATACAAACC
CACCGCTCAA AACTCCTTGA TTGGGTGTAT ATTTACCTTT TATGGAGCCT AATTATCTAT
TTGGTCAGGT TACTCTCAAA TAGCTTTACT AATACCAATA TGGCCGCGAA TGAAATATTT
TTTATTTTAT GGGACCCCGT ACCCACCATC TGGTTTATTT ATGCTTTGGC ACTTTCGCAT
TTAGTCACTT TGCTCGTAAG GAATATTTCG CCAAACATAG TCATAGGTGT AGCGGTTGCT
GCGAATTTGT TAAACAGTTT CTATTTTGGT TGGTTCGAAG GCAGCATTTT TGAACGTTTC
GCTTGGATAT ACCTTTTCTA CGCCATTGGC TTTTTTAAAG GGAATGAGAT TATTAGGGTC
ATCAAAAGTG ACAAACTAGC ACTCTTTGGG CCCTTGTTCT TCGTGGGTTT CGGGATATTT
ATCGCGCTGT ACCGTTCAGA GTTGCACATG GTCACTAAGC CCATTGTTTC CTTGTTGATG
GCTGTGGCTT TTTTAATTAT TTGCTATCGT ACCGAGACCT TATTTAAAAA TACGAAGCTG
TTTAAATTTA GCGTATACGT AGGGAGCATT AGTTTATTTA TATACCTCAC CCATTTTGCC
TTGCCTGCCG CCACTCGGAT GTTATTGAAT AAAATTGGGC TTTATTCGTT TTCAGCCAAT
ATACTATTGG CTGTAGGGCT AGCGGTTTGT ATCGGTATTA TTGCGAGTAA GTTATCCACT
ACACAACCCA TAAAACTATT GTTCAACCGT CCTTAG
|
|---|
| Protein sequence | MTSSKTKVRE RQDWLDLAKG LGICLVVMYH TCEGILNSFE YDTETIQALT SFFRSWLMPM
FFMVSGILIR NSIKNKPIQT HRSKLLDWVY IYLLWSLIIY LVRLLSNSFT NTNMAANEIF
FILWDPVPTI WFIYALALSH LVTLLVRNIS PNIVIGVAVA ANLLNSFYFG WFEGSIFERF
AWIYLFYAIG FFKGNEIIRV IKSDKLALFG PLFFVGFGIF IALYRSELHM VTKPIVSLLM
AVAFLIICYR TETLFKNTKL FKFSVYVGSI SLFIYLTHFA LPAATRMLLN KIGLYSFSAN
ILLAVGLAVC IGIIASKLST TQPIKLLFNR P
|
|---|
| |