| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1091 |
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| Symbol | |
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| ID | 4172630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1311017 |
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| End bp | 1312306 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054097 |
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| Product | exopolysaccharide production protein |
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| Protein accession | YP_660671 |
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| Protein GI | 109897416 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.802391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA CTCTTGATAC CTTAAAACGT GCTTATTTAT TCACCACGGT TTTCTACTAC
TTTGGCTTTT TAAGTTTCAC CTCACGTCTA TTAGCGGGAG GTCGAGCTGA CGATTTAATG
AGCGCCAATG CTTCGGGTAA TGCCGCTAAG CAAATTGTCG GTATTCTGCT ATTGCTAACG
GGCATCTATC TTTTACTTAA GGTCGATAAA AAATTACTGT TTTCCATGCT CATTAAGAGT
TTATGGTGGT GGGTGCTAAT CGCCTTTTTC TTAGCGTCCA TATATTGGTC CTATGAGCCG
GGCATTACCC TGCGCCGCAG TATCGCTTTT ATTACACTGG TTGTGGCAGG TTTTTGTGTC
GCCGCACACT TTAACGCCGA ATCGTTAATG TATTTTATCG CTAAAACCAT ATTCGTTGCT
GCCGTCATGG GCCTCATTTA TTTGGTTATA TCACCGAGTA ATGCGTTAGG TGGTCATGGC
GAAGGTGAAC GTGCAAATAT GTTTATCGGT ATCATGGGCG ACAAAAATGG CGGGGCGCGG
TTATACGCTT ACGGTATTTT GATACTTGTT GGCCTTGGCA ATTACCGCAC TCGTAACCAT
AAAATTATGC TAGCGGTTTT GGGGATCTGC TTAGTGTTTG CCAATTCAGC GACAGCCATC
GTCATGGTAT TCGCTGGTGT GGGCTTAATC ACGCTATTTA AGGTTATGCG CACTAACAGC
CCGAATGTTA ACTTACGCCG TGTTGTGATT ATCACGTTAT TATTAGCCGC AGCAGCTGTC
GCGGTTTCCT TTCTATACAC TTTTTTATTA GAGCTACTTG GGCGAGACCC AACCTTGACA
AACCGCACTG TTATTTGGGG GTTGCTCGAT GAGTATATTC AAGCTGAAAG TACCTTAGGC
TATGGCTTCG GTGCATTTTG GGTCAGCGAC GCCGTCGCCA GTTTCGTGGC TCGTTGGAGC
TATATCGGTA ATGCCCATAG TGGTTATTAT GAGGTTCTAC TGTACGGTGG GTATACCGGA
TTGGTGTTAG TTATTATTCT GACCCTTAAA ATAATTAAGG ATTTGGTTCA AGGGTACATT
ATTAGCAAAA ATAGTGAACT GTTAGCAGCC TTGCTTGCCA TTGTTTTATT GCAATGTGTA
GTTAATTATA TCGGTTTCGT TGTAATCAAT CACAATAGCC CTGATATGCT AATTTACAGT
GTAATCTCAT TTATCGCGAT GTTGTCAATC TCCGCTAAAG CACCTGTCAA TCGTGAACAA
AAACCTAATT TAAGAATTGA TCAAATATGA
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| Protein sequence | MKITLDTLKR AYLFTTVFYY FGFLSFTSRL LAGGRADDLM SANASGNAAK QIVGILLLLT
GIYLLLKVDK KLLFSMLIKS LWWWVLIAFF LASIYWSYEP GITLRRSIAF ITLVVAGFCV
AAHFNAESLM YFIAKTIFVA AVMGLIYLVI SPSNALGGHG EGERANMFIG IMGDKNGGAR
LYAYGILILV GLGNYRTRNH KIMLAVLGIC LVFANSATAI VMVFAGVGLI TLFKVMRTNS
PNVNLRRVVI ITLLLAAAAV AVSFLYTFLL ELLGRDPTLT NRTVIWGLLD EYIQAESTLG
YGFGAFWVSD AVASFVARWS YIGNAHSGYY EVLLYGGYTG LVLVIILTLK IIKDLVQGYI
ISKNSELLAA LLAIVLLQCV VNYIGFVVIN HNSPDMLIYS VISFIAMLSI SAKAPVNREQ
KPNLRIDQI
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