| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1090 |
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| Symbol | |
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| ID | 4172629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1309875 |
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| End bp | 1311002 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054096 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_660670 |
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| Protein GI | 109897415 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.638047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA TCAGTATTGT GTTGCATGAT TTGCGTGGTG GTGGCGCAGA AAAAATGATG
GTGCGCTTAG CGAATCAGTT AGCGCAAAAT GGTGATACTG TAGAAATGAT ACTATTGACC
GCAGGTGGGG TTAATAAATC ATTTTTAAGT GAATCGGTAA CACTCGTTGA GTTGAATTCG
GCCCGCACTT TGTCTGCTTT TGCGCCCTTG CGTAAACACC TAAAGCAGTC AAATCCAGAT
GGCATATTAT CCGCTCTCAC CCATGTCAAT GTCATTACCG CTGTCGTTTG TGCCAGTTTA
GGTTGGTCAA AGCGATTATC TGTTAGTGAA CGAAATACGT TTTCACTCGA TCGCAAAGTA
AATAATGGCC TAGTGATGCG TATAACCTAT GGCGTTGCGC CCTACATTTA TCGCTTAATT
CCCAACCCTG TTATCGCTGT ATCAAAAGGT GTGGCTGATG ATCTTGTCGA TTGCTCTATT
GCTAGGCAGC AAGATGTATG TACTGCATCA AACCCAGTGA TCACAGAAGA CACGCGAGAA
GCGGCTAAAC AAGATGCGAA ACATCCTTGG TTAGTTAACC ATGAGTGCAA AACTGTTGTT
GCAGTGGGTC GCCTTAGCGA TCAAAAAGGC TTTGATATGC TTATCGATGC ATTTTCTCTC
GTATCAAAAG AGATAAAAGC ACGATTAGTC ATTTTCGGTG AGGGTGAACT AAGAACTGCG
CTACAAGCGC AAATTGATCG ACTGGACTTA ACCGCACACG TTGACCTCGC TGGTTACACC
GACAACCCTA TTGCCGAAAT ACAACAAGCC GACTTATTTG TGTTGTCTTC ACGTTTTGAA
GGTAGCCCGA ATGTATTGGT TGAGGCGATG TCAGTTGGAT GTAAGGTGGT TGCTTTTGAT
TGCCCATCAG GGCCAATGGA AACGCTCAAA GGCGGTGAAG TTGCTCCCTT GGTTGAATAT
AAAAACGTAG CAAAGTTAGC AAAGGTTATG CTCACTGAAC TTGCGAGTGA AAATCTTCAA
GAAAACCGCA ACAGGATCAT TCAAGCCGTT AATCGTTTTA GTGCAGAAAA TTCTGCCAAA
GAATACCGAG CGCTTATTCT CAATGACAGC GCTTTGCAAC AGAAGTGA
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| Protein sequence | MAKISIVLHD LRGGGAEKMM VRLANQLAQN GDTVEMILLT AGGVNKSFLS ESVTLVELNS
ARTLSAFAPL RKHLKQSNPD GILSALTHVN VITAVVCASL GWSKRLSVSE RNTFSLDRKV
NNGLVMRITY GVAPYIYRLI PNPVIAVSKG VADDLVDCSI ARQQDVCTAS NPVITEDTRE
AAKQDAKHPW LVNHECKTVV AVGRLSDQKG FDMLIDAFSL VSKEIKARLV IFGEGELRTA
LQAQIDRLDL TAHVDLAGYT DNPIAEIQQA DLFVLSSRFE GSPNVLVEAM SVGCKVVAFD
CPSGPMETLK GGEVAPLVEY KNVAKLAKVM LTELASENLQ ENRNRIIQAV NRFSAENSAK
EYRALILNDS ALQQK
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