| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1087 |
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| Symbol | |
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| ID | 4172626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1306704 |
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| End bp | 1307696 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054093 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_660667 |
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| Protein GI | 109897412 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATT TAGTCACTGG AGCAGCTGGG TTCATTGGAA ATTATGTCGC TGAAAAGCTT
TGCGCAGAGG GGCATGACGT TATTGGGTTA GACAACCTTA ACGATTACTA TGACCCAAAC
CTAAAGTTGG CGAGACTTAA ACGCATCGAG CATTGTAAAA CATTTACGTT TGTTAAGGCC
GATATTTCTG ATCGCAACAC TATTGCAGCA TTATTTTCTC AAGAAAAATT TGACCGCGTG
ATACATTTAG CAGCGCAAGC TGGGGTGCGT TATTCGATTG AAAATCCAAT GGCGTATATA
GATTCAAACC TAACGGGTAT GGCTACCATT CTCGAAGGTT GTCGTCACAA CAATGTCGAG
CATTTAGTTT ATGCATCTTC TAGTTCTGTT TATGGTGCAA ATAAAAAAAT ACCGTTTGCC
GAAGGTGACC GTGTAGATTA TCCGGTTTCA CTTTATGCAG CGACCAAGAA GTCGAATGAA
CTCATGGCGC ATACCTACAG CCATTTATAT TCGTTGCCTA CAACCGGTCT GCGCTTCTTC
ACTGTGTATG GCCCCTGGGG CAGACCAGAC ATGGCGCCAT TCTTGTTTAC TGATGCTGTG
GTAAATGACA GAGCGATTAA AGTTTTTAAT GACGGCAAAA TGCAGCGAGA CTTCACTTAC
ATTGATGATA TCGTCGAAGG AATTTTACGT ATCCAAAACG TAATACCGAA ACCGCGCGAA
GAGTCAAACA GTAGCTCTGA ATCTTCGCCT TTCTACAAGC TATACAACAT CGGTAACAAC
ACGCCTGTCG AATTAGAAGC GTTTATTGGC TGTATAGAGA ATGCGCTAAG CAAAAAAGCG
GTGAAAAATT ACATGCCAAT GCAGGACGGC GATGTCGTAA GAACGTTTGC TGATATTACA
AATTTAGAAA GCGAAATCGG CTTTAAGCCC CAAACTGAGC TCCAAGATGG AATCAATAAC
TTTGTAGGCT GGTTTAAGCA GTATTATTCG TAG
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| Protein sequence | MKYLVTGAAG FIGNYVAEKL CAEGHDVIGL DNLNDYYDPN LKLARLKRIE HCKTFTFVKA
DISDRNTIAA LFSQEKFDRV IHLAAQAGVR YSIENPMAYI DSNLTGMATI LEGCRHNNVE
HLVYASSSSV YGANKKIPFA EGDRVDYPVS LYAATKKSNE LMAHTYSHLY SLPTTGLRFF
TVYGPWGRPD MAPFLFTDAV VNDRAIKVFN DGKMQRDFTY IDDIVEGILR IQNVIPKPRE
ESNSSSESSP FYKLYNIGNN TPVELEAFIG CIENALSKKA VKNYMPMQDG DVVRTFADIT
NLESEIGFKP QTELQDGINN FVGWFKQYYS
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