| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1081 |
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| Symbol | |
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| ID | 4172620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1296393 |
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| End bp | 1298954 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054087 |
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| Product | hypothetical protein |
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| Protein accession | YP_660661 |
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| Protein GI | 109897406 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAGC TGAACAAAAT CATGGGCTTT GGTGCACATC TGTTAATGGC GACAATTCTT
CTTGGCCTGG CAAGCTGCGC GCAATTTGAT GCGCCTAAGC ATTATGCGGT AAATGGTCAA
CTTGGTGACT ATTTAGTCAA TCAAATAAAT CAGCAAAAAA TCACGAGTCG TAGTGAGATT
GTCAGTATGC TGAAAGATCC TAGCATCAGC TCAAAAAAAT CTAATCGCTT TCTAATACAA
AATGAGCAAG ATACGGCAAT ACTCCTCAAA GAAATCACTA CCTCACAAGA TGTAACACAG
GCCGTTATCA GATTGATTGA AAGTGATTCA AAAATGGCTA GTAAATGGGT AACGCTCGCT
TTACGTCTAT ATCCAATTGA TGCGTATCGA ATGCTAGAAC AGTTATATGC TGACTCAACA
ATCCAAAGTA CGCTTTTAGA ATCAGCTGCG CTTAAAGCTG GACTAGATCC AGCCAGATTG
TTTCCCGCCA CTACATCAAG TGATTTAGAC CATAGGATTG TGCCACTCAT TCATTCCGCG
AGTATCACCA TTTATAACCA AAGCGAAGAT ACTGATACAC GACTGTGGTT TAAGCCATCT
GGAGCAACCC AGTGGACACC GGCTTTAGCG TTAGAATGGG AGCCGATACA AGGGGCTCTA
TCGGGGTCAA TCGTGCGTTT GGAACCTCAA ACCGTATACG AGGTAAAGCT GGAATATGTA
GAAAATGGTC AAATTATCGA TCAGCAACAA TACAGCTTTC AAACTCGTCC TAACTCCCCA
CCTATTGACC CAGATAAGAT TTACTATCTC TCTGATATAT ATACAGGCGG ACAACTCGAT
TTAACAACCT TGGGTATTCA AGGCAGCGAA GAAGGGTGGG CGCTGATTAT TGGTGATGGT
ACTGAGATCG TCGCTGCTGA AGGTGACAAT GCCGCCATTG ATATAGGTGG GCAGAGTTAC
ATTAAATTCG AAAACATAAC CGTGAAAGGG GGCAGATTGT ATGGCATCGG TGCCAAACAA
GCACATCACT TATGGATAGA CGGCTGCGAC ATATCTGAGT TTGGACGAGC TGCAGGTGAT
ATGCGCGATG GTGTGGCTTA TGAGAATGTT GAAAGTACCA AGGCGATAAA TTACGACTCC
GGTATCTTCC TCCAAGAAAC AGGGGTAGTA ACCATTGAAA ACTGCGAAAT ACACAGTCCT
AAGGGCAAGG CAAATCATTG GCAGTACGGG CATCCCTATG GCCCTAGCGC ACTATTGTTG
GCTGCTCGTC ACTCGGTAGA GGAGTACCGA GGACAATACA TTATTCGCAA TAATCGGTTT
TATGGTACTG ATGCTAAAAG ATTTAACGAC GTCATTGAAA GCCGCGCAAA TGCGCGTTCG
TGGGGGGGCT TTCTTAGAGA TTCGGCGATA CATAATAACT ATCTTGCTTA TGCAAATGAC
GACCTCATCG AACTTGATGG TGGGCAAAGC AACGTGTTGT TTTACGACAA TGAACTAGAG
CAAGGCTACT GCGGAATAAG CGCGATCCCC AATATGTTGG GTCCAAGTTA TATCTTCAAT
AATTATATTC ACAATTTAGG TGATGAAAGA CAAAAAGCGT GGGCGGCCAT AAAGCTCGGT
GGTTTAATGT CAGCCCCAGC AGGGGTGGTT AATATTTTCG AAAATTTGAT TGTAACCAGC
AGCAATGGCA TTACTGCGTC TAGGTTCGAA AGTGATTATA CTTTCTGGGT TAATGCAAGA
AACAATGTGT TAATCCATGA TAAATATTGG ACCAAAATGG GGCAGGGCAT ATACGATGTT
GAACAATATG CTAGTTCAGA ATTCATCAAT AACCTTATCT ACAATAGCAG TTACCAAGCT
CCTGCAGTGC AAGCTAATAT GGGATCTGAC TTTTACCATC CTTGGTCTTA TCAACTATCA
CAAATAGAAA ATATCAATAG TACTGGTGCA AGTTTTGACT TAGAAGTCGA CGAGCGCTTT
ATCATTTCCA ACTTCTCAAG CACGTCGCCT GCGAGCCAAA GCATATTAGC TCAAACTAAC
TCGGGTGTTG GCGAGTCGAA TGCTGCGATC AATTTTAACG ATACAGCCAT AAAATCATTC
GATACCCAGG ACGAAGCTGG GGATTATATT ATAAACGATA CAGGCGCTAC GCTTACCCTG
CTTGGAAATA CATGGAAGAG TGTGCAGGGG GAATACGAAA TCACACCTCA AACAACCTTG
ACGTTCGAGC TGAAAAATAA CGGAGCAGGT GAAATCGTGG GTATTGCGTT TGAGAACGAC
AATCAACTGA CAAGCTCAAG GCTATACAAA TTCAGCGGTA CCCAGCAATG GTCAAATAAT
GCTTACAAAT ATACCAATGT CGGCGATTTT CAAACCATCA CTTTGCCCAT AGGTCAAATG
TCTACCGGAG AGATTGATAG ACTCGTTTTC GTTTTAGACG ATGATAATCC CACGGGGACC
CTGGCCGAAG TCTCATTCAA AAACGTCAAG TTTATAGAGC CCACCGCTAC TCAACAAAAT
ATTGTTAATT CAATAACTCA AGTCGGGATA TCGAATAAAT AA
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| Protein sequence | MVKLNKIMGF GAHLLMATIL LGLASCAQFD APKHYAVNGQ LGDYLVNQIN QQKITSRSEI
VSMLKDPSIS SKKSNRFLIQ NEQDTAILLK EITTSQDVTQ AVIRLIESDS KMASKWVTLA
LRLYPIDAYR MLEQLYADST IQSTLLESAA LKAGLDPARL FPATTSSDLD HRIVPLIHSA
SITIYNQSED TDTRLWFKPS GATQWTPALA LEWEPIQGAL SGSIVRLEPQ TVYEVKLEYV
ENGQIIDQQQ YSFQTRPNSP PIDPDKIYYL SDIYTGGQLD LTTLGIQGSE EGWALIIGDG
TEIVAAEGDN AAIDIGGQSY IKFENITVKG GRLYGIGAKQ AHHLWIDGCD ISEFGRAAGD
MRDGVAYENV ESTKAINYDS GIFLQETGVV TIENCEIHSP KGKANHWQYG HPYGPSALLL
AARHSVEEYR GQYIIRNNRF YGTDAKRFND VIESRANARS WGGFLRDSAI HNNYLAYAND
DLIELDGGQS NVLFYDNELE QGYCGISAIP NMLGPSYIFN NYIHNLGDER QKAWAAIKLG
GLMSAPAGVV NIFENLIVTS SNGITASRFE SDYTFWVNAR NNVLIHDKYW TKMGQGIYDV
EQYASSEFIN NLIYNSSYQA PAVQANMGSD FYHPWSYQLS QIENINSTGA SFDLEVDERF
IISNFSSTSP ASQSILAQTN SGVGESNAAI NFNDTAIKSF DTQDEAGDYI INDTGATLTL
LGNTWKSVQG EYEITPQTTL TFELKNNGAG EIVGIAFEND NQLTSSRLYK FSGTQQWSNN
AYKYTNVGDF QTITLPIGQM STGEIDRLVF VLDDDNPTGT LAEVSFKNVK FIEPTATQQN
IVNSITQVGI SNK
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