Gene Patl_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1073 
Symbol 
ID4172612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1286678 
End bp1288945 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content43% 
IMG OID638054079 
Productprotein-tyrosine kinase 
Protein accessionYP_660653 
Protein GI109897398 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.956847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCGC AATTAAATGG ACAATTAGAG GCGAAACTAC TGGACTCAGA AACGATCGAC 
TTGGGCCAAT ATTGGCAGAC AGTCCGACGT TATCTTTGGC GTATTATTAG CTTAGCTATT
TTTATTACGG TATTGGTGGC TCTCATTGTG ATGTCAATCA CGCCGCAATA CACAGCAACT
GCCAAGTTAT TGATTGAATC TAAACAGGCC AAGGTACTTT CTATAGAGGA AGTATATGGG
CTCGATTCTT CTAGGAAAGA GTACTTTCAA ACTCAATATG AAATCCTCAA GTCTCGTCAG
ATTGCAGAGA AAGTTGTTGA AAAGCTCAAG CTTTATGAAA ACCCGACTTT TGCACCTGGC
TACGAAGCGA GCCAAGCTAA CTTTGTAAGT AAGCAGTTAT CCGCTTTAAA ATCTGGAATC
ATCTCAGCTT TGCCTTTTTT ACCACAAAAG GAAAAGACCG AACTTACTGA AGCTCAGCAG
CTTAACTCCC GAAAAGGATA TGCTACTTGG CAGGTGATGA AGTCCCTTAA AATCACACCG
ATCAGCAACA CGCAGATTGT CGAAATTAGT TTCGAGCATG AAGACCGCAA ATTTGCAGCT
ATAGCTGCAA ATGCTGTTGG CGATGTTTAT ATTGAAAACT ATCTCGAGTC AAAGCTCGAT
ATGACGACTA AGGCGACTAC TTGGTTAAAC GAAAGTTTAC AAGGTTTGCG CGCTAAACTA
AGTACTGCCG AGAAACGACT ATCTGAGTTT TACGAGACTG AAAAGTTAGT CAATATTGAT
GGTGTTGTTG GCCTAGCTGC CGAAGAATTA CAGAAGTTGA GCCAGCAGTT GCTGGAGGCT
CAGACCGCTT ATAACCGCGC TGAAACACTC TACAATCAGG TTAATTCTGG GGCTACAATT
TCAGAGCTAG GTGACTTGCC TGAGGTGATT AATCACCCTG CAGTACAAAA CGTAAAACGC
GAACAAATTG GCGCTCAAAG CCGAGTGTCT GAGTTGAGCA AAGTATACGG CCCTAAGCAT
CCAAAAATGA TTGCAGCTCA AGCTGAGTTA CGCTCGATAC AAGACAGCCT TAATGATCAA
ATTCGGTCGC TAGTGTCAGG CGTTAATACA GAATTCAACA CAGCCAAGTT AAAATTAGCT
GCACTTAAAG AAGAAGTAAG CGTCAACAAA GAAAATTTTC GTAAGTTGAC CAATCTTGAA
AGTCGCCATA AGGCATTGCA GCGTGAAGTG GATATTAATC AGCAACTTTA CAGTTCGTTT
TTCACTCGCT TAAATGAAAC CTCTGAGTTG GGTGGCTTTG AGTCGGCCAA TGCACGTATG
TTAGATTTAG CTGTTCCACC TGGTGCGCCA TCTAAGCCAA AGAAAGGTTT AATAATCGCT
GCAGCCTTTA TTGTGAGTTT AGGCTTCGGA GTGTTTTTAG CTTTAGCCAT GGACGCACTA
AACAGCGGTA TTCGCTCTGT AGAAGATGTT GAACGCAAAC TAGGGCAACG CATGCTCGGA
CTTATCCCAT GGGAAGCGCA CAGCAAGAAG AAAAATTTAT CTGTCAGGCA CTTTTTTGAC
GGCAAGCATC ATAGTTTTAG CGAGGCTGTT CGTACTCTCA GAACTAGCTT ACAGTTACTG
AACATAGATA AACCCTCAAA AACTATATTA GTAACCTCTA GTGTTCCCAG AGAAGGTAAA
AGTACGGTAT CTATTAACTT AGCGTTCGCT ATGGGGCAGC TAAGCAAAGT ATTGTTGATT
GATACTGATC TACGACGCCC TACGCTTGCT AATCAATTCA GCTTACCTGG GTTTCAACCG
GGCTTGGCCA ATTTAATTGC AGGCACGCAT ACCTTTGAAG AGTGTATCGT CACTGACGAA
ATGTCAGGTA TAGACTTGAT ATGTGCTGGT ACTGTTCCTC CTAACCCTCA GGAGTTGTTG
GCTTCTGATA GCTTTAAAGC CCTAATGCAA GACTTGAAAG GCAGGTATGA ACACATAATT
GTAGATAGTG CACCAACTCA GGCGGTTAGT GATGCAATTG TGGTATCAAA AGTATGTGAC
TCTGTGGTCT ATGTGGTCAA GGCGGATAGT ACGAGCGACA AACTTATAAG CAATGGCTTA
AGCCGTTTCT TGCAAGTTGG TCACCGCGTT GACGGCGTCG TGTTAAACCA AGTCGATTTG
CGTAAGGCGA AAAAGCACGG TGAATACACG GGTTTTTATG ACCAATACGG TTATAACAGT
TATAACTACG AATCTAAAAG CAAGGCTGGC AGTAACAAAC AATCTTGA
 
Protein sequence
MSAQLNGQLE AKLLDSETID LGQYWQTVRR YLWRIISLAI FITVLVALIV MSITPQYTAT 
AKLLIESKQA KVLSIEEVYG LDSSRKEYFQ TQYEILKSRQ IAEKVVEKLK LYENPTFAPG
YEASQANFVS KQLSALKSGI ISALPFLPQK EKTELTEAQQ LNSRKGYATW QVMKSLKITP
ISNTQIVEIS FEHEDRKFAA IAANAVGDVY IENYLESKLD MTTKATTWLN ESLQGLRAKL
STAEKRLSEF YETEKLVNID GVVGLAAEEL QKLSQQLLEA QTAYNRAETL YNQVNSGATI
SELGDLPEVI NHPAVQNVKR EQIGAQSRVS ELSKVYGPKH PKMIAAQAEL RSIQDSLNDQ
IRSLVSGVNT EFNTAKLKLA ALKEEVSVNK ENFRKLTNLE SRHKALQREV DINQQLYSSF
FTRLNETSEL GGFESANARM LDLAVPPGAP SKPKKGLIIA AAFIVSLGFG VFLALAMDAL
NSGIRSVEDV ERKLGQRMLG LIPWEAHSKK KNLSVRHFFD GKHHSFSEAV RTLRTSLQLL
NIDKPSKTIL VTSSVPREGK STVSINLAFA MGQLSKVLLI DTDLRRPTLA NQFSLPGFQP
GLANLIAGTH TFEECIVTDE MSGIDLICAG TVPPNPQELL ASDSFKALMQ DLKGRYEHII
VDSAPTQAVS DAIVVSKVCD SVVYVVKADS TSDKLISNGL SRFLQVGHRV DGVVLNQVDL
RKAKKHGEYT GFYDQYGYNS YNYESKSKAG SNKQS