Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1073 |
Symbol | |
ID | 4172612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1286678 |
End bp | 1288945 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638054079 |
Product | protein-tyrosine kinase |
Protein accession | YP_660653 |
Protein GI | 109897398 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.956847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCGC AATTAAATGG ACAATTAGAG GCGAAACTAC TGGACTCAGA AACGATCGAC TTGGGCCAAT ATTGGCAGAC AGTCCGACGT TATCTTTGGC GTATTATTAG CTTAGCTATT TTTATTACGG TATTGGTGGC TCTCATTGTG ATGTCAATCA CGCCGCAATA CACAGCAACT GCCAAGTTAT TGATTGAATC TAAACAGGCC AAGGTACTTT CTATAGAGGA AGTATATGGG CTCGATTCTT CTAGGAAAGA GTACTTTCAA ACTCAATATG AAATCCTCAA GTCTCGTCAG ATTGCAGAGA AAGTTGTTGA AAAGCTCAAG CTTTATGAAA ACCCGACTTT TGCACCTGGC TACGAAGCGA GCCAAGCTAA CTTTGTAAGT AAGCAGTTAT CCGCTTTAAA ATCTGGAATC ATCTCAGCTT TGCCTTTTTT ACCACAAAAG GAAAAGACCG AACTTACTGA AGCTCAGCAG CTTAACTCCC GAAAAGGATA TGCTACTTGG CAGGTGATGA AGTCCCTTAA AATCACACCG ATCAGCAACA CGCAGATTGT CGAAATTAGT TTCGAGCATG AAGACCGCAA ATTTGCAGCT ATAGCTGCAA ATGCTGTTGG CGATGTTTAT ATTGAAAACT ATCTCGAGTC AAAGCTCGAT ATGACGACTA AGGCGACTAC TTGGTTAAAC GAAAGTTTAC AAGGTTTGCG CGCTAAACTA AGTACTGCCG AGAAACGACT ATCTGAGTTT TACGAGACTG AAAAGTTAGT CAATATTGAT GGTGTTGTTG GCCTAGCTGC CGAAGAATTA CAGAAGTTGA GCCAGCAGTT GCTGGAGGCT CAGACCGCTT ATAACCGCGC TGAAACACTC TACAATCAGG TTAATTCTGG GGCTACAATT TCAGAGCTAG GTGACTTGCC TGAGGTGATT AATCACCCTG CAGTACAAAA CGTAAAACGC GAACAAATTG GCGCTCAAAG CCGAGTGTCT GAGTTGAGCA AAGTATACGG CCCTAAGCAT CCAAAAATGA TTGCAGCTCA AGCTGAGTTA CGCTCGATAC AAGACAGCCT TAATGATCAA ATTCGGTCGC TAGTGTCAGG CGTTAATACA GAATTCAACA CAGCCAAGTT AAAATTAGCT GCACTTAAAG AAGAAGTAAG CGTCAACAAA GAAAATTTTC GTAAGTTGAC CAATCTTGAA AGTCGCCATA AGGCATTGCA GCGTGAAGTG GATATTAATC AGCAACTTTA CAGTTCGTTT TTCACTCGCT TAAATGAAAC CTCTGAGTTG GGTGGCTTTG AGTCGGCCAA TGCACGTATG TTAGATTTAG CTGTTCCACC TGGTGCGCCA TCTAAGCCAA AGAAAGGTTT AATAATCGCT GCAGCCTTTA TTGTGAGTTT AGGCTTCGGA GTGTTTTTAG CTTTAGCCAT GGACGCACTA AACAGCGGTA TTCGCTCTGT AGAAGATGTT GAACGCAAAC TAGGGCAACG CATGCTCGGA CTTATCCCAT GGGAAGCGCA CAGCAAGAAG AAAAATTTAT CTGTCAGGCA CTTTTTTGAC GGCAAGCATC ATAGTTTTAG CGAGGCTGTT CGTACTCTCA GAACTAGCTT ACAGTTACTG AACATAGATA AACCCTCAAA AACTATATTA GTAACCTCTA GTGTTCCCAG AGAAGGTAAA AGTACGGTAT CTATTAACTT AGCGTTCGCT ATGGGGCAGC TAAGCAAAGT ATTGTTGATT GATACTGATC TACGACGCCC TACGCTTGCT AATCAATTCA GCTTACCTGG GTTTCAACCG GGCTTGGCCA ATTTAATTGC AGGCACGCAT ACCTTTGAAG AGTGTATCGT CACTGACGAA ATGTCAGGTA TAGACTTGAT ATGTGCTGGT ACTGTTCCTC CTAACCCTCA GGAGTTGTTG GCTTCTGATA GCTTTAAAGC CCTAATGCAA GACTTGAAAG GCAGGTATGA ACACATAATT GTAGATAGTG CACCAACTCA GGCGGTTAGT GATGCAATTG TGGTATCAAA AGTATGTGAC TCTGTGGTCT ATGTGGTCAA GGCGGATAGT ACGAGCGACA AACTTATAAG CAATGGCTTA AGCCGTTTCT TGCAAGTTGG TCACCGCGTT GACGGCGTCG TGTTAAACCA AGTCGATTTG CGTAAGGCGA AAAAGCACGG TGAATACACG GGTTTTTATG ACCAATACGG TTATAACAGT TATAACTACG AATCTAAAAG CAAGGCTGGC AGTAACAAAC AATCTTGA
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Protein sequence | MSAQLNGQLE AKLLDSETID LGQYWQTVRR YLWRIISLAI FITVLVALIV MSITPQYTAT AKLLIESKQA KVLSIEEVYG LDSSRKEYFQ TQYEILKSRQ IAEKVVEKLK LYENPTFAPG YEASQANFVS KQLSALKSGI ISALPFLPQK EKTELTEAQQ LNSRKGYATW QVMKSLKITP ISNTQIVEIS FEHEDRKFAA IAANAVGDVY IENYLESKLD MTTKATTWLN ESLQGLRAKL STAEKRLSEF YETEKLVNID GVVGLAAEEL QKLSQQLLEA QTAYNRAETL YNQVNSGATI SELGDLPEVI NHPAVQNVKR EQIGAQSRVS ELSKVYGPKH PKMIAAQAEL RSIQDSLNDQ IRSLVSGVNT EFNTAKLKLA ALKEEVSVNK ENFRKLTNLE SRHKALQREV DINQQLYSSF FTRLNETSEL GGFESANARM LDLAVPPGAP SKPKKGLIIA AAFIVSLGFG VFLALAMDAL NSGIRSVEDV ERKLGQRMLG LIPWEAHSKK KNLSVRHFFD GKHHSFSEAV RTLRTSLQLL NIDKPSKTIL VTSSVPREGK STVSINLAFA MGQLSKVLLI DTDLRRPTLA NQFSLPGFQP GLANLIAGTH TFEECIVTDE MSGIDLICAG TVPPNPQELL ASDSFKALMQ DLKGRYEHII VDSAPTQAVS DAIVVSKVCD SVVYVVKADS TSDKLISNGL SRFLQVGHRV DGVVLNQVDL RKAKKHGEYT GFYDQYGYNS YNYESKSKAG SNKQS
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