| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1064 |
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| Symbol | |
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| ID | 4172850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1274087 |
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| End bp | 1274695 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054070 |
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| Product | TonB family protein |
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| Protein accession | YP_660644 |
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| Protein GI | 109897389 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGAT ATCTCATAGC GATAGCATTG TCAGCCATTG TGACGCTGAG CCTGTTTTTC
GTGATGCAAT CACTGATCAA AAGTGGTGGT AGCGCATTAA CTGAGCCTGC AAAGGGCAGT
GTGCTGGATT TCGTGCGGGT GAAAAAAGAA GAATCCGCCC AGAAGAAAGA TCGTAAACCC
AAGAAGCCGC CTAAGCCAGA AGCGCCACCT CCAGCGATGG AGCAACCGCA GATGGATTCG
CCTACGCCGA ATGCCGAGGG CAATGGAATG GACTTTGGAG CCGACGTTAA CGAAGGTTTA
TCGTTAGATG GCGGCTTAGC ACTTGAATCG GGTGACGGGG AATATCTGCC GATTGTGAAA
GTGGCACCGG TTTATCCTCG ACGTGCGTTA TCTCGTGGTA TCGAAGGCTA CGTTATTGTT
GAATTTACAG TGTCGAAGCA GGGTTCGGTG AAAAATCCGT TTGTGGTAGA TGCCCAGCCA
GCAGATCTGT TTAATCAAGC GGCAATTGAT GCAGCACTTA AATTTAAATA CAAACCTCGG
GTAGTCAACG GTGAACCTGC TGAAGTGGCT GGTGTGCAAA ACCGTATTTC TTTCCAGATT
GATGGTTAA
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| Protein sequence | MLRYLIAIAL SAIVTLSLFF VMQSLIKSGG SALTEPAKGS VLDFVRVKKE ESAQKKDRKP
KKPPKPEAPP PAMEQPQMDS PTPNAEGNGM DFGADVNEGL SLDGGLALES GDGEYLPIVK
VAPVYPRRAL SRGIEGYVIV EFTVSKQGSV KNPFVVDAQP ADLFNQAAID AALKFKYKPR
VVNGEPAEVA GVQNRISFQI DG
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