| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1061 |
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| Symbol | |
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| ID | 4172847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1271703 |
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| End bp | 1273112 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054067 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_660641 |
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| Protein GI | 109897386 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.297335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA ATCAATTAAT TAAAAATATC GCACTTACTT TGCTTGTTAC ATTAACGGCA
ACTTCAGCAA TGGCGGCCGA TCCGTTACCG AAGAAAGAGT CAGCACTGGA TTTAGATGCG
CTGCTTAAGC AGTTAGAGCA AGGTCAGTTT CAGCAGACTC AACAGAACAA CCAGCGTGAA
AAAGAGTTTG TTGCTAAGCG TGCTGAGCAA GATCAGATGC TACGTGATGC AGGCAAAAAC
CGTGACAACG CGTTACGCAC ATCTGAAACC TTAGAAACGC AATTCGAAGA AAACGAATTC
AAGTTAGGTG ATTTAAACGA TGCGTTAACT AAGCGTTTAG GCTCACTTAA AGAGTTGTTC
GGTGTACTTC AACAAGTCGC TGGTGACACT AAGAGCAAGT TCTTTAATTC TGTTATCTCC
GCTCAAATCC CTAATCGTGC AGAGTTTCTA GATGAAATGG CACAGTCCAT GGGCTCAAGC
TCAAAGCTTG CCTCTATAGA AGAAATTGAG CGTGTTTGGT TTGAAATGCA ACGTGAAATG
ACCGAATCAG GAAAAGTCAC GCGTTTCAAC GCCGACGTGG TTGAAGCCGG CGGCGCTAAA
GTCAGCAAAG AAGTGGTGCG CGTGGGCACG TTTGCCTTGG TTGCTGATGG CAAATATCTT
GATTATGAAG GTTCAACTAA CTCACTTGGC GAGTTAATTC GTCAGCCTGC TGGTCGTTAT
ACCGCAAGTG CAGAAGCGCT TCAGGCGTCA AATGGCGAGC TAGTTGAGTT TGGTCTAGAC
CCAACTGGCG GGTCAATTCT TAAATTATTG GTTCAGGCAC CAAGCTTAAA AGAGCGTGTT
GAACAAGGTG GTTTAGTCGG GTACATCATC CTTATCGTTG GCGCAATTGG TTTATTGTTA
GCCCTTGAGC GTTTAATCAC TTTGACTGTG ATTAAAACCA AAGTAAACAA GCAGCTCAAA
TCTGACACGT TTACCTCTAA CAACCCACTT GGTCGCGTGA TGCAAGTGCG TGACAAATAT
CCACAAGCGG ATACTGAGTC GCTTGAGCTA CACCTGACAG AAGCTATCTT GGGTGAAATA
CCTAAGTTGT CTCGGAACCT TACGATCATC AAAATCATCT CTGTGGTAGC GCCTCTTATG
GGTCTACTTG GTACGGTGAC GGGTATGATT AACACCTTCC AAGCAATTAC CTTGTTCGGA
ACGGGTGACC CTAAATTGAT GGCGGGTGGT ATCTCCACCG CATTGGTGAC GACCGTACTT
GGTTTGGTTG TGGCTATCCC AATGACCTTG CTCTACGCGA TGCTCAACAC ACGCTCTAAA
GACGTAGTCT TTATTCTGCA AGAACAAGCG TCAGGTGTGA TTGCCGAGCG TGCTGAGCGC
ATGGAAACAA AGTCAGCTCC AAGCGCCTAA
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| Protein sequence | MKMNQLIKNI ALTLLVTLTA TSAMAADPLP KKESALDLDA LLKQLEQGQF QQTQQNNQRE
KEFVAKRAEQ DQMLRDAGKN RDNALRTSET LETQFEENEF KLGDLNDALT KRLGSLKELF
GVLQQVAGDT KSKFFNSVIS AQIPNRAEFL DEMAQSMGSS SKLASIEEIE RVWFEMQREM
TESGKVTRFN ADVVEAGGAK VSKEVVRVGT FALVADGKYL DYEGSTNSLG ELIRQPAGRY
TASAEALQAS NGELVEFGLD PTGGSILKLL VQAPSLKERV EQGGLVGYII LIVGAIGLLL
ALERLITLTV IKTKVNKQLK SDTFTSNNPL GRVMQVRDKY PQADTESLEL HLTEAILGEI
PKLSRNLTII KIISVVAPLM GLLGTVTGMI NTFQAITLFG TGDPKLMAGG ISTALVTTVL
GLVVAIPMTL LYAMLNTRSK DVVFILQEQA SGVIAERAER METKSAPSA
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