Gene Patl_1060 details

Gene Information

• Locus tag: Patl_1060
• ID: 4172846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1270925
• End bp: 1271695
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054066
• Product: hypothetical protein
• Protein accession: YP_660640
• Protein GI: 109897385

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.14975
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTCTA CCACTATGTT ATCAGCCAGC TTACTCAGTG TAAGTTTGCT TTTATCTGCA 
TCTGGCAATG CCCAGGAAGA TGCATACCTG AAGCCAGCTG TTGAAAAAGC GACGAAGATC 
AACAACTCAG CAGCGAGTTC ACAGCAGAAA ATCAACAAGC TCAATGATCA GATTGATAAT 
AAGTTGCAGC AATTCAAAGC CATTAATAAA GAGACTGAAG GCCTAGAGGT ATACAACACT 
CAGTTGCGCA AGCAAATTGA GAACCAAGCA CAGGAAATGG CCGACTTAAA CGCTGCAATT 
GATGATGTGA GTGTTATTGA GCGTCAAATT ACGCCGTTGA TGATGCGCAT GATTGATGGG 
CTCGAGCAGT TCATTGCTCT TGATGTGCCT TTTTTAGCCC AAGAGCGAGC AACACGTATT 
GCCGGCTTAA AAAGTATGAT GGACAAAGCT GATGTGGCGC CCTCTGAGAA ATTTCGCCGC 
GTGATGGAAG CCTACCAAGT TGAAATGGAC TACGGACGCA CATTAGAAGC TTACGCCGGT 
TTACAAAATA TTGATGGGCA AGAGCGTAAC GTTGATTTTC TGCGCGTTGG CCGTACCGCT 
TTAATATATC AAACGCGTGA CGCAAGCATG CAAGGTATGT GGAATGCGCA AACTCGTCAG 
TGGGATGCCT TACCGTCTAG TTACCGCACC CAAGTTACTA AAGGCCTGCG TATGGCTAAA 
AAACAAATGG CACCAGACCT ACTGATGTTG CCTGTTGCGA TCACAGATTA A 

 

Protein sequence

MKSTTMLSAS LLSVSLLLSA SGNAQEDAYL KPAVEKATKI NNSAASSQQK INKLNDQIDN 
KLQQFKAINK ETEGLEVYNT QLRKQIENQA QEMADLNAAI DDVSVIERQI TPLMMRMIDG 
LEQFIALDVP FLAQERATRI AGLKSMMDKA DVAPSEKFRR VMEAYQVEMD YGRTLEAYAG 
LQNIDGQERN VDFLRVGRTA LIYQTRDASM QGMWNAQTRQ WDALPSSYRT QVTKGLRMAK 
KQMAPDLLML PVAITD