| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1055 |
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| Symbol | |
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| ID | 4172841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1260653 |
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| End bp | 1262254 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054061 |
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| Product | hypothetical protein |
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| Protein accession | YP_660635 |
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| Protein GI | 109897380 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTA AGAATTTTTT CAACGCGTCT GCAGTAGCGA CTGCTCTAAT ACTTGCTGGT
TGTGGCGGAG ATATAAAAGT GACTCCGACA GTCATCGATA ATAGCGTTGA TAATAGCGTA
ACCAACCCGA CTACAGGTGG TGGCGATAGC ACAACTAACG TTTGTGCCTC TTACGAGAAT
GATAGCGGCG AGACTGTTCA AGGTACGTAT GACGGCCAAG ATTGTTCTTA CTCAACCACG
TTCGTTAGCG CAAGTAACCC TCTTACAACA AACGTGACGC TTGATGATTT GAGCAATGAT
GGTGTGCATT ATTTCCTAGG CTCATTGGTG GTTGGTGAAG GTTGTAATAC CGACGGCGGA
ACGTGCACTA TCGAAACTGA CGGCCCCACC CTGACTGTAG AAGCAGGTGC AACAGTTGCT
TTTAACCAGT CTACTTCTTT CTTATTAGTG AATCGTGGTG CGAATATTGA AGCTGAAGGA
ACCCTAGCTG ACCCAATCAC ATTTACTTCA GTGAATGCGT TTACACGTCT TGATTCAGTC
GGTAATGGTG CTCAGTACGG TGATTGGGGC GGCATGATGA TCGACGGTTT CGGTATTACT
GACCAATGTA CCGATGCTCA GCGTGGTGCA AATACCTGTA GCGCAGAGAG CGAAGGCGTA
ACCAGTTATT ACGGTGGTAG CGACAACGCT GACGATAGCG GTACGCTTAA ATTCGTTAAA
ATTCATTATG CAGGCGGTTT ACCAGCAGGC CAAGAAGCCG GAAACGATTT GAACTCGCTC
AGCTTGTTTG CTGTTGGTTC AGGGACTGAA ATTGACTATA TCGATATATA CCAAGGCTTC
GATGACGGTA TTGAATTATT CGGCGGTGCC GTTGACCTTA AGCACATCGT TATTACCGAT
ACTCAAGATG ACAGCTTAGA CATTGATGCA GGTTGGCAGG GGCGTGCGCA GTACGTTCTT
ATCAAGCAAG GTACAGTGGT TAATGCAAAT GGCGTGACCG TGAACATGGG TAACGGCGGT
TTCGAGTCTG ATGGGGTTAA AGGAACGTCT TCAGCTGAAG CGCCTGCGTC AGCGCCTGTG
ATTGCTAATG TAACCGTATT GACCACTGAT GGCTTGTCTA TTCGTGATGA CGATGAGTCA
ATCGCCATGA AGTTAGACGA TATGATTTCA GCTACTTGGT ACAACACATT ATTGGTTAAG
CCAGTTGCTA CGCAAACCTG GTGTATTAAT TACAGTGGTG ACGCCGCTGA AGTTATTGTT
AACGGCTCAG CGTCTATCCA TAACTCAGTA GCAGCCTGTG CTCAATTAGC TAATGCTGGC
AACGAAACCG TTACCTTTGG TAGTGATTCA ACTACGGTTC AAGAATGGTT CGAAGCGAAT
GACAGTGAAG TCGTTGGTGG CAATGCTGAC GTACTTGCTG CAAATGGCTT TGCAACGTTA
ACGACTGGCA CAGATATTAC TATTTCAGCA TTTGATGCCT CTACACTAGA TGCATTTTTT
GAGTCAACTG ACTACATAGG TGCGGTATCT GACACTGACA CTTCTTCTGA TTGGTACAAC
TGGGCAAACG ATGCGTTTAC CAACGCAGCT GCTGACGAGT AA
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| Protein sequence | MELKNFFNAS AVATALILAG CGGDIKVTPT VIDNSVDNSV TNPTTGGGDS TTNVCASYEN
DSGETVQGTY DGQDCSYSTT FVSASNPLTT NVTLDDLSND GVHYFLGSLV VGEGCNTDGG
TCTIETDGPT LTVEAGATVA FNQSTSFLLV NRGANIEAEG TLADPITFTS VNAFTRLDSV
GNGAQYGDWG GMMIDGFGIT DQCTDAQRGA NTCSAESEGV TSYYGGSDNA DDSGTLKFVK
IHYAGGLPAG QEAGNDLNSL SLFAVGSGTE IDYIDIYQGF DDGIELFGGA VDLKHIVITD
TQDDSLDIDA GWQGRAQYVL IKQGTVVNAN GVTVNMGNGG FESDGVKGTS SAEAPASAPV
IANVTVLTTD GLSIRDDDES IAMKLDDMIS ATWYNTLLVK PVATQTWCIN YSGDAAEVIV
NGSASIHNSV AACAQLANAG NETVTFGSDS TTVQEWFEAN DSEVVGGNAD VLAANGFATL
TTGTDITISA FDASTLDAFF ESTDYIGAVS DTDTSSDWYN WANDAFTNAA ADE
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