| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1052 |
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| Symbol | |
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| ID | 4172838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1256370 |
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| End bp | 1258109 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054058 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_660632 |
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| Protein GI | 109897377 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.17007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGC ATATGACTAA CGAAAAAAGC ACATTATCAA AGAAACTTTT GACACGTGTG
CTATCGGTGT ACTTTATATT GACCCTTATA GTCACCGTGG GACAAATAGT TACCGAGTAC
GTAAATGCTA AGAGTCATAT AGAAGGTGAG CTTCAAACAT TAAAAAACAC CTTTAGTACC
AGTTTGACTA GAGCCATGTG GGAACTAAAC ATGGCGCAGG CTAAATCGAT TGCCACAGGG
TTAATGGAAT TACCCATAGT AGAAGGTGTA CAAATCCGTG ACGAAAACGG TCAGTATATT
GCTAACTTAG GGCTGACCTC AGAGCAACCC GAATCCCCTA TCACTAAAGG TGTGGTAAAA
GATCATACGG GCAGCACCTT TGGCTATAGT TTTCCTTTAA TTTTTGAGTT TTCAGGACGT
ACATCATTGG TCGGTGATGT CACCTTGTAC TCCAGCGCGC AAATAATTTT TAGCCGTATT
GAAGTGGGTA TATTCTTTCT TATTGGTAAT GCGATTATCA AAACCGCGTT TCTAGTGTTT
TTGTTTATGA GCGCTTTTCG CACCATGCTG ACGAATCCCT TAAATGAGTT ACGCCAGCAA
ATTTCAGACT TTGATATCAA TGACTTAGAG TCTTCAAAAT TACATTTAAA TGTGCCTGAA
AAAAATGAGT TCACGGTTTT AGAGCAAGCC TATAATAGCT TGGTTGACGG CATGGTGGAC
TTTCAAAAGC GCCTAAATGG GACACAAGCC GAGTTGCGAG AAGCCAACCG AATGCTGGAT
GACCATAATA TATCGCTAGA GCAAGAAGTG GCTAAAAAGA CTGCGACATT GAGCAAGATC
ATGCTCGATT TGGAGCAGCA AAAAGACGAA CTGATAGTGA ACCAACGAGA GCTTCGCCAA
GAAAACGAAA ATCGTCAATT TATTGAAGAC GAGCTACGCA AAAGAAACAG TGAGTTAGCG
TCGTCCATGG ATACCCTTCA ACTGGCTAAA GATCAGTTAG TCGAATCAGA GCGAATGGCA
TCACTAGGAG GATTGGTTGC CGGTATAGCC CATGATGTAA ATACCCCGTT GGGCGTCGGC
GTAACGGCCA CCAGCTTCTT GCAAGAGAGA TTAAATACGT TGGAGAAAGC CTACCAAGAA
AAAACCTTGA CTGGCAGCAC AATGAACACA TTTTTGTCTG ATGCTCAACA AACCATTACC
TTGCTTACTA ACAATTTAAA TCGCGCATCA AACTTGATAT CGAGCTTTAA ACAAGTGGCT
GTTGATCAGG CAAGCGAAGC TGAAAGAGAA ATCGACTTAA AAGAATATCT CAATGAAATT
ATTCAATCAT TAGCCCCAAG CTTGAAGAAA ACCCAACACA TCATCAATAT AAGTTGCCCT
GACGACGTTG TTATTGTTTG TGCTCCGGGT ATGTTGGCGC AAATTTTTAC CAACATGGTG
ATGAACTCTG TCATTCATGG CTTTGAAGAT ATGAGTAAAG GCACTATCGA CATTGCAATA
ACCAAGCAAC CTGAAACGCT AACCATTGAT TATCGCGACA ATGGCAGAGG TTTGCCGAAA
GACTCATTAG CTAAGCACTT TGAAGCTTTC TACACTACTC GGCGCGAGAA AGGCGGCAGC
GGTTTAGGAA CACACATCAT GTATAATTTG GTTACCCAAA CGTTAAAAGG TGATATTGAA
GTATTCAGTG AGCCAGGTGA GGGTTTACGA TACGTACTGA CTATCCCGCT ACATTCTTAA
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| Protein sequence | MDWHMTNEKS TLSKKLLTRV LSVYFILTLI VTVGQIVTEY VNAKSHIEGE LQTLKNTFST
SLTRAMWELN MAQAKSIATG LMELPIVEGV QIRDENGQYI ANLGLTSEQP ESPITKGVVK
DHTGSTFGYS FPLIFEFSGR TSLVGDVTLY SSAQIIFSRI EVGIFFLIGN AIIKTAFLVF
LFMSAFRTML TNPLNELRQQ ISDFDINDLE SSKLHLNVPE KNEFTVLEQA YNSLVDGMVD
FQKRLNGTQA ELREANRMLD DHNISLEQEV AKKTATLSKI MLDLEQQKDE LIVNQRELRQ
ENENRQFIED ELRKRNSELA SSMDTLQLAK DQLVESERMA SLGGLVAGIA HDVNTPLGVG
VTATSFLQER LNTLEKAYQE KTLTGSTMNT FLSDAQQTIT LLTNNLNRAS NLISSFKQVA
VDQASEAERE IDLKEYLNEI IQSLAPSLKK TQHIINISCP DDVVIVCAPG MLAQIFTNMV
MNSVIHGFED MSKGTIDIAI TKQPETLTID YRDNGRGLPK DSLAKHFEAF YTTRREKGGS
GLGTHIMYNL VTQTLKGDIE VFSEPGEGLR YVLTIPLHS
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