| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1047 |
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| Symbol | |
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| ID | 4172833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1249988 |
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| End bp | 1250353 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054053 |
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| Product | histidine triad (HIT) protein |
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| Protein accession | YP_660627 |
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| Protein GI | 109897372 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.439434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAA CAATTTTTAC TAAAATCATT AATAAAGAAA TCCCCGCTGA GATCTTATAT
GAAGATGAAA TGTCTTTGGC GTTTAGGGAT ATCAACCCCC AAGCACCGAT GCACTTTTTA
GTGATACCGA AGAAGGCCAT TGCAACCATC AATGACATTG AAAAAGAAGA TCGTGAAGTG
GTCGGGCATT TGTCTTGGGT TGCTTCTCAT ATATTGAAAG AGCACGGTTT GGCTGAGCAA
GGCTTTCGTA CAGTGATGAA TTGCAATGAA TATGGCGGGC AAACTGTCTA TCACATTCAT
TTACATGTGC TGGCAGGTAA GCCTCTTGGC TGGCCGCCTT ATAGCGATAA ATTAAAAATC
GAGTAA
|
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| Protein sequence | MSETIFTKII NKEIPAEILY EDEMSLAFRD INPQAPMHFL VIPKKAIATI NDIEKEDREV
VGHLSWVASH ILKEHGLAEQ GFRTVMNCNE YGGQTVYHIH LHVLAGKPLG WPPYSDKLKI
E
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