Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1043 |
Symbol | |
ID | 4172829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1247613 |
End bp | 1248215 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054049 |
Product | hypothetical protein |
Protein accession | YP_660623 |
Protein GI | 109897368 |
COG category | [S] Function unknown |
COG ID | [COG0344] Predicted membrane protein |
TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000725883 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCAC TTAGCATTTT ACTCTTTTGT AGCGCTTATT TGTTGGGCTC AATATCCAGC GCAGTCTTGA TCTGTCGCGT GTTTATGCTG CCCGATCCGC GTAAAACGGG CTCTAACAAC CCAGGAGCGA CAAATGTTTT ACGCATTGGC GGTCGGCTAC CGGCAGCCTT AGTCTTTATT TTCGATGTGC TAAAAGGAAC CCTTCCAGTA TACGTGGGGT ATCTGCTAGG CATGCCTCCA ATCACTCTAG GACTAGTCGG CATTGCTGCC TGCTTAGGGC ACATCTACCC TTTGTATTTT AATTTCAATG GAGGAAAAGG CGTCGCCACT GCAATTGGCG CGATGCTGCC ATTGGGCTGG GAGTTAGTCA GTTTACTATT GGCCTGCTGG CTCGTGATAG TCTTTATCAC CGGGTATTCG TCTTTGGCCG CGATTATTTC AGTCAGCGTG GCGCCTTTTA TCACATGGTT TGTCAAACCG GCTTACACAG CACCAGTCAC CATGTTATGC ATACTGATAA TTGTGCGCCA CAGACAAAAC ATCATTCGTT TGATGAGTGG CCAGGAAAGT AAGATATGGG ATAAAGGGCG AACGAAAGAA TAA
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Protein sequence | MTSLSILLFC SAYLLGSISS AVLICRVFML PDPRKTGSNN PGATNVLRIG GRLPAALVFI FDVLKGTLPV YVGYLLGMPP ITLGLVGIAA CLGHIYPLYF NFNGGKGVAT AIGAMLPLGW ELVSLLLACW LVIVFITGYS SLAAIISVSV APFITWFVKP AYTAPVTMLC ILIIVRHRQN IIRLMSGQES KIWDKGRTKE
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