Gene Patl_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1043 
Symbol 
ID4172829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1247613 
End bp1248215 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID638054049 
Producthypothetical protein 
Protein accessionYP_660623 
Protein GI109897368 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000725883 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCAC TTAGCATTTT ACTCTTTTGT AGCGCTTATT TGTTGGGCTC AATATCCAGC 
GCAGTCTTGA TCTGTCGCGT GTTTATGCTG CCCGATCCGC GTAAAACGGG CTCTAACAAC
CCAGGAGCGA CAAATGTTTT ACGCATTGGC GGTCGGCTAC CGGCAGCCTT AGTCTTTATT
TTCGATGTGC TAAAAGGAAC CCTTCCAGTA TACGTGGGGT ATCTGCTAGG CATGCCTCCA
ATCACTCTAG GACTAGTCGG CATTGCTGCC TGCTTAGGGC ACATCTACCC TTTGTATTTT
AATTTCAATG GAGGAAAAGG CGTCGCCACT GCAATTGGCG CGATGCTGCC ATTGGGCTGG
GAGTTAGTCA GTTTACTATT GGCCTGCTGG CTCGTGATAG TCTTTATCAC CGGGTATTCG
TCTTTGGCCG CGATTATTTC AGTCAGCGTG GCGCCTTTTA TCACATGGTT TGTCAAACCG
GCTTACACAG CACCAGTCAC CATGTTATGC ATACTGATAA TTGTGCGCCA CAGACAAAAC
ATCATTCGTT TGATGAGTGG CCAGGAAAGT AAGATATGGG ATAAAGGGCG AACGAAAGAA
TAA
 
Protein sequence
MTSLSILLFC SAYLLGSISS AVLICRVFML PDPRKTGSNN PGATNVLRIG GRLPAALVFI 
FDVLKGTLPV YVGYLLGMPP ITLGLVGIAA CLGHIYPLYF NFNGGKGVAT AIGAMLPLGW
ELVSLLLACW LVIVFITGYS SLAAIISVSV APFITWFVKP AYTAPVTMLC ILIIVRHRQN
IIRLMSGQES KIWDKGRTKE