Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1022 |
Symbol | |
ID | 4173301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1213678 |
End bp | 1215207 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054028 |
Product | histidine ammonia-lyase |
Protein accession | YP_660602 |
Protein GI | 109897347 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGA AGTATCTTCT TCAACCTGGG AAGTTAACCA TAGAAACGAT GCGTCAAGTA CACAGGCGTC ATGTGCCAAT CACGCTCGCC CCCGATAGTT TTGAGCGCAT TCATAGCGCA GAACAAACCG TACGAGATGT CATAACCCAA GGTCGCACCG TATATGGTAT CAATACCGGT TTTGGGCTTC TGGCGAATAC TAAGATTGAG GTGGATGAAC TCGAGTTATT GCAGCGAAGT ATCGTGCTGT CGCATGCGGC TGGTATTGGC ACACTTATGT CTGCATCGAC CGTTAGACTC CTTATGCTAT TGAAAATCAA TTCACTAGCA AGAGGCTACT CAGGTATTCG ATTAATCGTT ATAGAAGCAT TGATCGCTTT GTACAATCAT CAAGTGTATC CGGCAATACC CGAAAAAGGT TCAGTAGGCG CGTCTGGTGA TTTGGCCCCT CTTGCGCATA TGAGCGCGGT TCTTTTGGGG GAAGGTGAGG TCATATATCA AGGAAATCAG ATTTCCGCCG AGAAAGGGCT GATGATCGCT GGCTTGCAGC CTATTTCATT AGCGCCTAAG GAAGGCTTAG CACTGTTAAA TGGTACGCAA GCATCAACGG CGTTTGCCTT GCAAGGGCTG TTTTATGCTG AAAATGCCTT AACGAGTTCT ATCGCTATTG GCGCGTTATC TGTTGATGCA GCGCTTGGCT CTCGTGTGCC TTTCAACGAG CGTATTCATA TTGTCCGGGG GCATCAAGCA CAAATAGACG TGGCAACAGG ATTTAGAACT TTGCTACAGG AATCTGAAAT AGGCAAATCA CATGGAGGGT GTGAGAAGGT ACAAGACCCA TACTCTTTAA GGTGCCAGCC ACAAGTGATG GGAGCATGCC TGCAGCAAAT GCGTTTCGCC AAACAGATTC TTGTCACCGA AGCAAATGGC GTGTCGGATA ACCCAATCGT CTTTTCAGAG TCGGACGACG TTCTTTCTGG CGGTAATTTT CATGCTGAAA CCGTGGCCAT GGCCGCTGAT ATGCTCGCCA TTGCCCTCGC AGAAATTGGC GCGCTTTCAG AGCGACGCAT GGCGTTACTC ATTGACTCTA GCTTAAGCGG TTTGCCGCCT TTTTTGGTGG ACAATGGCGG GGTGAATTCT GGTTTTATGA TTGCACAAGT AACAAGCGCC GCGCTAGCCA GCGAGAATAA AAGCTACGCT CATCCTGCGT CGATCGATTC CTTGCCCACC TCTGCCAATC AGGAAGATCA CGTCTCCATG GCGACGTTTG CGGGAAGAAG GCTACGAGAT ATTTTTGATA ACGTCGCGGG CATTTTGGCT ATTGAATGGT TGGCGGCTTC TCAAGGTATC GATTTTCGAT TTCCCTTAAA AACCAGTACG CAGTTGCAAA GTGTGCACGC TTTGATGCGC AGCAAGGTCA CTTTCTACGA TAAAGACAGG TACTTTTCTC CGGACATTGA GCAAGCCAAA TTATTAATTA CTCGCCATTC TCTAAGCGAC TTGGTGCAGC AAGATATTCA GCTTCTTTGA
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Protein sequence | MEQKYLLQPG KLTIETMRQV HRRHVPITLA PDSFERIHSA EQTVRDVITQ GRTVYGINTG FGLLANTKIE VDELELLQRS IVLSHAAGIG TLMSASTVRL LMLLKINSLA RGYSGIRLIV IEALIALYNH QVYPAIPEKG SVGASGDLAP LAHMSAVLLG EGEVIYQGNQ ISAEKGLMIA GLQPISLAPK EGLALLNGTQ ASTAFALQGL FYAENALTSS IAIGALSVDA ALGSRVPFNE RIHIVRGHQA QIDVATGFRT LLQESEIGKS HGGCEKVQDP YSLRCQPQVM GACLQQMRFA KQILVTEANG VSDNPIVFSE SDDVLSGGNF HAETVAMAAD MLAIALAEIG ALSERRMALL IDSSLSGLPP FLVDNGGVNS GFMIAQVTSA ALASENKSYA HPASIDSLPT SANQEDHVSM ATFAGRRLRD IFDNVAGILA IEWLAASQGI DFRFPLKTST QLQSVHALMR SKVTFYDKDR YFSPDIEQAK LLITRHSLSD LVQQDIQLL
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