Gene Patl_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1017 
Symbol 
ID4173296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1208246 
End bp1208902 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID638054023 
Productnitroreductase 
Protein accessionYP_660597 
Protein GI109897342 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCACC AAATTATCAA AGATTTAAGC ACGCGTTATA CAGTGAAAAA ATACGATACG 
TCTAAGCGGA TTTCGGATGA AGATATCGCC GTTATTAAAG AAGCGATCCG CTTATCCGCT
TCATCAATTA ATTCGCAACC TTGGAAATTT ATCCTAGTTG AAAGTGATGA AGGGAAGCAA
CGCTTACATG ATACGTTTGC AAATAAACAT CAGTTTAACC AGCACCATGC GAAAGAAGCA
TCACATACTC TTCTACTGGC ATACGACCCG CACTTTACTA AAGAAAAGTT TGTTAAACGT
GTTGATGCAG AGGTGAGTTC AGGTCACTTG CCCGCGGACA TGCGAGATTC CTTTATGGGG
GCATACGCTT TTGCTGAAAT GAATACGGAC GAGAGTGGAT ACAATGGCAG TTGGACCAAA
GCGCAAGTGT ATCTAGCACT TGGCAATATT ATGCACACAC TTGCACGATT AGGTATCGCA
TCTACACCGA TGGAAGGAGT TGATAAAGAG TTGATTGGTG AGAAATTCAG TGACGAGCTT
GATGGTCACA TTTGTGAAGT AGCCTTGGCT ATGGGCTATC AAAATACCGA TGACGATTGG
AACTATGGCT TGCCTAAAGC TCGCCTAGCC ATTGAGGAAA TCATTGCGGT TGTATAG
 
Protein sequence
MSHQIIKDLS TRYTVKKYDT SKRISDEDIA VIKEAIRLSA SSINSQPWKF ILVESDEGKQ 
RLHDTFANKH QFNQHHAKEA SHTLLLAYDP HFTKEKFVKR VDAEVSSGHL PADMRDSFMG
AYAFAEMNTD ESGYNGSWTK AQVYLALGNI MHTLARLGIA STPMEGVDKE LIGEKFSDEL
DGHICEVALA MGYQNTDDDW NYGLPKARLA IEEIIAVV