Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1017 |
Symbol | |
ID | 4173296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1208246 |
End bp | 1208902 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638054023 |
Product | nitroreductase |
Protein accession | YP_660597 |
Protein GI | 109897342 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCACC AAATTATCAA AGATTTAAGC ACGCGTTATA CAGTGAAAAA ATACGATACG TCTAAGCGGA TTTCGGATGA AGATATCGCC GTTATTAAAG AAGCGATCCG CTTATCCGCT TCATCAATTA ATTCGCAACC TTGGAAATTT ATCCTAGTTG AAAGTGATGA AGGGAAGCAA CGCTTACATG ATACGTTTGC AAATAAACAT CAGTTTAACC AGCACCATGC GAAAGAAGCA TCACATACTC TTCTACTGGC ATACGACCCG CACTTTACTA AAGAAAAGTT TGTTAAACGT GTTGATGCAG AGGTGAGTTC AGGTCACTTG CCCGCGGACA TGCGAGATTC CTTTATGGGG GCATACGCTT TTGCTGAAAT GAATACGGAC GAGAGTGGAT ACAATGGCAG TTGGACCAAA GCGCAAGTGT ATCTAGCACT TGGCAATATT ATGCACACAC TTGCACGATT AGGTATCGCA TCTACACCGA TGGAAGGAGT TGATAAAGAG TTGATTGGTG AGAAATTCAG TGACGAGCTT GATGGTCACA TTTGTGAAGT AGCCTTGGCT ATGGGCTATC AAAATACCGA TGACGATTGG AACTATGGCT TGCCTAAAGC TCGCCTAGCC ATTGAGGAAA TCATTGCGGT TGTATAG
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Protein sequence | MSHQIIKDLS TRYTVKKYDT SKRISDEDIA VIKEAIRLSA SSINSQPWKF ILVESDEGKQ RLHDTFANKH QFNQHHAKEA SHTLLLAYDP HFTKEKFVKR VDAEVSSGHL PADMRDSFMG AYAFAEMNTD ESGYNGSWTK AQVYLALGNI MHTLARLGIA STPMEGVDKE LIGEKFSDEL DGHICEVALA MGYQNTDDDW NYGLPKARLA IEEIIAVV
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