Gene Patl_1016 details

Gene Information

• Locus tag: Patl_1016
• ID: 4171992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 1200965
• End bp: 1201738
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638054017
• Product: hypothetical protein
• Protein accession: YP_660596
• Protein GI: 109897341

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000119639
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TAATAAAAGT AGCGTTCATT GCGAGCTTAA TTTCGTCCGT ATACAGTGTC 
GGTGCTCAAG AAGCTGAGGT TTCGAATGAT AACCATGCAA CTAGTTCATT CGTAAAACGT 
CAAGTCGCTC AAAATATGTC GATAGGTCGT GCCGTCAAAA GTATTGCTAG TAATTACCCA 
CAAGAAACAT CCAGTGTGGT GAGCACGGCA TTAGATATGT ATCCAGATAG GTATCAAGAA 
ATTATACATG CCGCAATATC CGCTCAGCCT ATGTTGACAG AAGATATCGT CAAGATTGCT 
TTAGAAAAGG AAATCGCTAG TTGTACTGCG ATTGTTAAAA CCGCAATTAA TGCTGAACCA 
AGCTATGTTG ACTTTGTTGT AACAGCTGCA GCTAATTCAA CCCCTGATGA ACTGAACGAG 
ATTGTGAGAG TCGCAGTCAT TACAGAACCT GATTCCGCTG ACTTTATTGT TCAGTCGTTA 
GCGCAACAGC ACCCTAACAA AATCGTTGAT ATACTAACTT CTGCGATTGA TGCAGTTCCG 
CTCGTCGGCG AGTATGTGGT TGAGGCATTG CTTGCTATCT TTCCTAACGA TGCCGAAAGT 
GTCGTTAGTA CAGCTGTTCG TGAGTCTGGG CCACAAAGAG ATAATGTTAG AAGAATTATT 
GAGACGGCAC AAAATTTCGG ACTTGATGAA GACAGCATAT ATAAGTATGC AAAGGAAGGT 
GGCGCTACTG ATGAAGAAAT TACAGCCGCA CTAAAAATTG TCACTGAACA ATAG 

 

Protein sequence

MKKIIKVAFI ASLISSVYSV GAQEAEVSND NHATSSFVKR QVAQNMSIGR AVKSIASNYP 
QETSSVVSTA LDMYPDRYQE IIHAAISAQP MLTEDIVKIA LEKEIASCTA IVKTAINAEP 
SYVDFVVTAA ANSTPDELNE IVRVAVITEP DSADFIVQSL AQQHPNKIVD ILTSAIDAVP 
LVGEYVVEAL LAIFPNDAES VVSTAVRESG PQRDNVRRII ETAQNFGLDE DSIYKYAKEG 
GATDEEITAA LKIVTEQ