Gene Patl_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1002 
Symbol 
ID4173504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1193365 
End bp1193670 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content47% 
IMG OID638054003 
Productribosomal protein S14 
Protein accessionYP_660582 
Protein GI109897327 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0199] Ribosomal protein S14 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000566034 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG AATCAATGAA AGCGCGCGAA GTTAAACGCG CCAAGCTAGT TGCTAAGTTC 
GCTACTAAAC GAGCTGAACT TAAAGCAACT ATCAGCAACG TCAACTCTTC TGACGAAGAA
CGTTGGGACG CTGTTCTTAA GCTACAACAA CTTCCACGTG ATTCAGCTCG TACGCGTCAA
CAAAATCGTT GTCGTATTAC TGGCCGTCCA CATGGTTTCC TACGCAAGTT TGGTCTTAGC
CGTATTAAGT TGCGTGAAGC AGCTATGCGC GGCGAAGTAC CTGGCCTTAA AAAAGCCAGC
TGGTAA
 
Protein sequence
MAKESMKARE VKRAKLVAKF ATKRAELKAT ISNVNSSDEE RWDAVLKLQQ LPRDSARTRQ 
QNRCRITGRP HGFLRKFGLS RIKLREAAMR GEVPGLKKAS W