| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1000 |
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| Symbol | rplX |
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| ID | 4173502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1192485 |
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| End bp | 1192799 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054001 |
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| Product | 50S ribosomal protein L24 |
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| Protein accession | YP_660580 |
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| Protein GI | 109897325 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00244473 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAGAA AAATTCGTCG TGATGATGAA ATCATCGTTT TGGCAGGTAA AGACAAAGGA
AAACTAGGCA AAGTGCTTAA AGTTCTTCCA GCGGCTGACC GCTTAATCGT TGAAGGTGTG
AACTTGGTGA AGAAGCATCA GAAACCTAAC CCTCAATTGG GTGTTACTGG TGGCGTTATT
GAGAAAGAAG CATCAATTCA CGTGTCAAAT GTAGCGATTG TTAACCCTAA AACGGGTAAA
GCAGATCGCA TAGGTTTCCG TTTTGAAGAC GACAAAAAAG TTCGTTTCTT CAAATCTGAC
GGTGAACTGG TTTAA
|
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| Protein sequence | MARKIRRDDE IIVLAGKDKG KLGKVLKVLP AADRLIVEGV NLVKKHQKPN PQLGVTGGVI
EKEASIHVSN VAIVNPKTGK ADRIGFRFED DKKVRFFKSD GELV
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