| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0998 |
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| Symbol | |
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| ID | 4173500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1189933 |
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| End bp | 1191573 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053999 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_660578 |
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| Protein GI | 109897323 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.231761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTAA AGACGCCCTT AGAAATGATG TACCACTGGG AAGATACAAC GCCGCAGAAG
GTATATTTGA AGCAACCGAT TAACGGTGCT GTTATTAGTT ATACATGGGT ACAGACGGCA
GACAAAGTAC GCCGCGCGGC AGCTGGATTA ATTGCGCTGA ACTTACCAGC GGGTAGCCAC
ATTGCCGTAT TATCTAAGAA CTGTGCTGAA TGGTTCATTG CTGACTTAGC TATTATGTTG
GCCGGTCATA TATCCGTACC AATTTATTCA ACAGCCGGCG AGAAAACGAT TCAATATGTA
TTAAATCACG CAGCATGTCC TGTTATTTTT GTGGGCAAGT TAGATGATAC TGCTGAGCAA
GTAGCAGCGA TCCCTGAGGG CGTTACTAAG CTAGCATTTT CTTATCCTGG TATTGAAGCC
GATAAGGATT GGGATTCATT GATGGCAAAT GAGCCCTATT TAGAGCGCCC AGTACCCGAT
ATGAGCAGCA CTATGACGAT TATCTATACG TCGGGCAGCA CGGGTAACCC TAAAGGTGTA
GTGCATACCT ATAATTCGAT TAGTTGGGCT GCGAGCAATT CAAGAAATGA ATTAAGCGTT
GGCGATGAAG ACCGTATATT GAGTTACTTG CCATTGGCGC ATATCACCGA GCGCGTTTTG
GTGGAAATGG CTAGTTTCTA CGCAAACACT CAAATTGGTT TTATAGAGTC GCTTGATACA
TTCAATCGCG ATATTTGCCA CCTAAGGCCT ACGTTATTTA TTTCTGTTCC GCGTCTTTGG
ACTCGTTTTC AAATGGGGGT TTTAGCAAAC ATGCCCCAAA AGAAACTCGA TTTTCTGCTG
AAAATACCGT TTGTCGGCAA TATAGTCGCG AGTAAGATTA GAACTAAACT TGGCTTAGAT
AAGGCTCGTA TGTGCGCCAG TGGATCCGCT CCTATTTCGC CAGCCACCCT TAAATGGTTT
TTGAAAGTAG GCGTTAAAAT ATCTGAAGGA TGGGGAATGA CAGAAAACAG TGCTTACGGT
ACCTGTTGTG TTCCATTTAG AGAGGACAAA ATTGGTAGTA TTGGCCGCGC TTATGAAGGT
GTCGATATTA GAATTGGCGA AGAGGGCGAG ATACAAGTTA AAGGGCCTTG TAATATGCAG
GAATATTATC TGGAGCCTGA AAAAACCGCT GAAACCTTTA CCGAAGACGG ATACTTGCGC
ACAGGTGATA AGGGCGCAAT CGATAGCGAT GGCTATATTA AAATTACCGG GCGCTTAAAA
GAGATATTTA AAACAGCCAA GGGTAAGTAT ATCGCGCCAG TACCGATTGA AGCTCTCATT
ATGGGCAACT CTTCTGTAGA GCAAGTCTGT GTCACCGGCT CGCAATTAAA ACAGCCTATT
GCGTTAGTCG TATTATCAGA AGATGCCACC AAACAAGACA AAGACAAAGT AGAAAAGAGC
CTGTTAGCAA CCTTGGAATC GGTTAACGCT GGTTTAGAAA GTCACGCAGT ACTCGACCGT
TTAGTGATCA TGAAAGATGA TTGGACTGTA GAGAACGGAC TACTAACCCC TACGCTAAAG
ATAAAGCGCC ATTTACTGGA AGAAAAATAC GATGGACTAA TTAACGCTCC CGAGAGAGAA
AAGTTAATTT ATCAAAAATA G
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| Protein sequence | MSLKTPLEMM YHWEDTTPQK VYLKQPINGA VISYTWVQTA DKVRRAAAGL IALNLPAGSH
IAVLSKNCAE WFIADLAIML AGHISVPIYS TAGEKTIQYV LNHAACPVIF VGKLDDTAEQ
VAAIPEGVTK LAFSYPGIEA DKDWDSLMAN EPYLERPVPD MSSTMTIIYT SGSTGNPKGV
VHTYNSISWA ASNSRNELSV GDEDRILSYL PLAHITERVL VEMASFYANT QIGFIESLDT
FNRDICHLRP TLFISVPRLW TRFQMGVLAN MPQKKLDFLL KIPFVGNIVA SKIRTKLGLD
KARMCASGSA PISPATLKWF LKVGVKISEG WGMTENSAYG TCCVPFREDK IGSIGRAYEG
VDIRIGEEGE IQVKGPCNMQ EYYLEPEKTA ETFTEDGYLR TGDKGAIDSD GYIKITGRLK
EIFKTAKGKY IAPVPIEALI MGNSSVEQVC VTGSQLKQPI ALVVLSEDAT KQDKDKVEKS
LLATLESVNA GLESHAVLDR LVIMKDDWTV ENGLLTPTLK IKRHLLEEKY DGLINAPERE
KLIYQK
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