| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0997 |
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| Symbol | |
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| ID | 4173499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1188877 |
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| End bp | 1189770 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053998 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660577 |
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| Protein GI | 109897322 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAC TCCCGCCCCT CAATGCGCTT CGTTATTTTT TAGCGGCTGC AGAAACATTG
AGTTTTAAAG CAGCAGCGGA ACAAATGTTT GTTACTCAAG CTGCTATCAG CCAGCACATT
AAAACGCTAG AAGTCTTCTT CGGTTGTCAG CTGTTTGTAA GAGGTCACCG GCATGTGTCT
TTAACAAAGG CGGGGGAAAG ACTATTACCT GATATTGCCA CAGGCTTCAG CTTTCTAGAT
AAAGGCGTAG GCAACTTGGT GATGGATCCA AGACCCAATA TTTTAAACTT AACCGTGATT
GAGTCGTTAT CTTCTCGTTG GCTTGTACCG CGTTTGTATT TGTTCCAGCA AGAATATCCC
CACATAAATG TAAGGATCCA GCCAACAAAC CGTTTATTAA ATTTTGACCA AAATGAATTA
GATTTGGCGA TACGATTTGG CATCGGCGAT TACCCTCAGT TAAAAAGCAG AAAGTTGGCT
CAGGATACTA TTCACCTAGT TTGTCATCCT GGGTTAGCTA AACAGATTGA CACTGCTCAG
TCTGTTTCCC GTCATCCCAC TTTAACCGAG AAAAGCAGCG ATATTTTGCC CGCCTGGAAA
TCTTTCTATC AACTGCATCG GATAAACCCA GACGTGGGGC GCAATGCTCT ACATGTAGAT
GATTCCAGTG TCACTATTAT TGAAGCGGCG CTAGCGGGGC AGGGCATAGC AATGGTGCGT
AATAGCCTGA TATTCGAACA GTTAGAAAAA GGGCAATTGG TGAAACTGTT CAATTTTAGT
TTCAAGTGTC ATTACGCATA TTATTTGGTG GCGCCTGAAG CGCATTTTAA GCGCGAAAAG
ATTCAGTGTT TTTCGAATTG GCTGGAGGGA ATGTTTAGCG AAATCCCACA ATGA
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| Protein sequence | MNKLPPLNAL RYFLAAAETL SFKAAAEQMF VTQAAISQHI KTLEVFFGCQ LFVRGHRHVS
LTKAGERLLP DIATGFSFLD KGVGNLVMDP RPNILNLTVI ESLSSRWLVP RLYLFQQEYP
HINVRIQPTN RLLNFDQNEL DLAIRFGIGD YPQLKSRKLA QDTIHLVCHP GLAKQIDTAQ
SVSRHPTLTE KSSDILPAWK SFYQLHRINP DVGRNALHVD DSSVTIIEAA LAGQGIAMVR
NSLIFEQLEK GQLVKLFNFS FKCHYAYYLV APEAHFKREK IQCFSNWLEG MFSEIPQ
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