| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0991 |
|---|
| Symbol | fre |
|---|
| ID | 4173493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1182710 |
|---|
| End bp | 1183423 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638053992 |
|---|
| Product | FMN reductase |
|---|
| Protein accession | YP_660571 |
|---|
| Protein GI | 109897316 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.863137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCACA CCCCTTGTAA GGTTGATTCC ATTGTTGCTC TCAACCCAGT CGTCAGTTTA
GTCACCCTGA TCCCACAGCA GTCTTTTACA CATCGAGCTG GTCAGTATTT GAAAGTCGTC
ATGGATGAAG GCGATCAGCG TCCATTCAGT ATCGCTACAG CACCGCGAGA AGACGGTAAA
ATTCAATTGC ATATTGGCGC GGAGCCAGGC AATAGTTATG CAGGTGAAGT TCTTGAAAAA
ATGCGAACTG AGGGTGAAAT TACCGTTAAT GGCGGTTTAG GAAATGCCTA CGTTCAACTG
GAAGATAGCA TGCCGACCAT TTTACTCGCA GGGGGAACAG GGTTTTCCTA TACCCAAGCT
ATCTTGCAAA AAATGCTCGA ATCTTCTAGC CAGGTCAAAG GCCACAAAGA TCCAATTTTC
CTATATTGGG GAACGCGCTC AACCGCTGAT ATGTACGCAT ACGATGAACT TGTCGCTCTG
GATAAAAAAC ACGAGCACTT TACCTTTGTT CCCGTGGTGG AACATCCGGG TCATCAATGG
TCAGGCAAAA CCGGTTGGGT GCATAAAGCA GTACTCGAAG ATTTTGTCAG CCTAGAGCCT
TATCGGGTTT ACGTAGCTGG TCGCTTTGAA ATGGCTGGCG TGGCAAGAGA AGACTTTCAT
CAGCAAGGGT TAATCTTAAA GAACTTGTAC GGCGACGCAT TCGAATTTAT TTAA
|
|---|
| Protein sequence | MHHTPCKVDS IVALNPVVSL VTLIPQQSFT HRAGQYLKVV MDEGDQRPFS IATAPREDGK
IQLHIGAEPG NSYAGEVLEK MRTEGEITVN GGLGNAYVQL EDSMPTILLA GGTGFSYTQA
ILQKMLESSS QVKGHKDPIF LYWGTRSTAD MYAYDELVAL DKKHEHFTFV PVVEHPGHQW
SGKTGWVHKA VLEDFVSLEP YRVYVAGRFE MAGVAREDFH QQGLILKNLY GDAFEFI
|
|---|
| |