| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0989 |
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| Symbol | |
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| ID | 4173491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1181180 |
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| End bp | 1182088 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053990 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_660569 |
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| Protein GI | 109897314 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0786107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCTC TGACCAAAGG CGATTTTATG GGGCATTCAG GTGTAAACAT TAGTTATGCC
TATTTGTGTC ATCCGCACGC GATTGGTGCC GTGGCTATCT CTACAGGGCG AATTGAGTCT
TGGGTTAAAT ATCAAGAAGT CATGTTCGAC TTATATCAAA ATGGATATTC GGTGTTCATT
CATGATCACC GTGGTCAAGG CTTATCAGGG CGCATGACCC GCAACCCCCA TATGGGTTTT
GTGGACGATT TTACCGATTA CGTTGCTGAC TTTAAGCTGT TTTACCAGAA AATCATTGAG
CCTAACACGC AGCATAGGCC TCAGTTATTG TGCCACTCTA TGGGGTGTGC AATTGGGGCT
TTGTATGTTT TAGCGCATCC GCAAGATTTC GCTCAACTAA TTGTGTGTGC CCCTATGTTT
GGCATTCGCC CCGCGTTACC TAATTGGCTG GCGAGTATTT TAATAGGCGC AAACTTGCTT
ATTAGTCGCG GTTTAGGTCA TGACGCTAGT TATTTTCTTG GCCAAAAAAA TTATCAGGAA
ACCGAGTTCG CGCTTAATGA GCTCACCCAC AGCGAAATAC GTTATCGCCT CTTCAGAGAC
GAGTATAATT TGCAACCAGA AGTGCAATTA GGAGGTGTGA CCGGGCATTG GTTGCGAGCA
GCCCTAAAAG CGATGGATGC CATTGAAGCT CAAGCGAGTC AAATATCGAT CCCCGTTTGG
GCCATTCAAG CAGAGGCGGA TACAGTGGTG GACAACAAAA GGCAAAGTCG TGTATTAGCC
AAATTGCCCC ATTGCGAAGT ACAACAAATT TTTGGTGCTC GGCACGAAAT GCTGCTTGAA
GAAGACCAAT ATCGTCGCCC CTGTTTAGCG GCTATTCTAG CGTTTCTGCG ATTGGCAAAT
GACAGATAA
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| Protein sequence | MRSLTKGDFM GHSGVNISYA YLCHPHAIGA VAISTGRIES WVKYQEVMFD LYQNGYSVFI
HDHRGQGLSG RMTRNPHMGF VDDFTDYVAD FKLFYQKIIE PNTQHRPQLL CHSMGCAIGA
LYVLAHPQDF AQLIVCAPMF GIRPALPNWL ASILIGANLL ISRGLGHDAS YFLGQKNYQE
TEFALNELTH SEIRYRLFRD EYNLQPEVQL GGVTGHWLRA ALKAMDAIEA QASQISIPVW
AIQAEADTVV DNKRQSRVLA KLPHCEVQQI FGARHEMLLE EDQYRRPCLA AILAFLRLAN
DR
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