| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0988 |
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| Symbol | |
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| ID | 4173490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1179575 |
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| End bp | 1180978 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053989 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_660568 |
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| Protein GI | 109897313 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00659588 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCGTC TTCTATATTT AAACCCATTT CGAAGTTTGT ATGGTCGTAT TTTTTTGTGG
TTCTGGGGCA CAACTATCGT CATGATCGTC GGTGCTTACT GGATTATGCA AAATATTGCT
CCACCAGTTG AATATTTACC CATGGATGAT AAGCAGCATT TCATGCTGGA AAACTCGGTT
AGAGCTTTGC AGCGGCAAGT TTCCCGTAGC CCAGATGGTG AGCCGTTAGA GAATATTCTT
GAACGCACCA GTCAGCGCGG TAAGTTGATG ATGATTTTGC TCAATCCAAA AACCAAGTCG
TTCACACTCA AGGGGCCGTT ACCACGCTTA CCCAATGAAA AGCCCTTTCT CGATTTAATT
GGCTCTGCAA ATCCATTGCG CATTGCAACA CCTATCGGCG ATATGTTTGG CCCAATGGCG
ACCGATATTG CTGGCACCGA ATATTTGTTA TTTGTAGGAC GAATACGGCC CATGGGTTTC
GCTAGCGATA TGCGCCACCG CCCACCCTTA TTGCTTATCT GCCTGGTATT GTTAATAAGT
GCGGTATTGT GCTCATTAAT TGCTTGGTCA CTTGTAAAAC CATTAAAACA ATTGCAAGTG
GCCACTAAGC GCATGGCTAG CGGTGCACTT AGCAGTCGAG TTGGATCTGC CAGCTATAGA
GGCGATGAAA TAGGGCGCTT AGGGCGAGAT TTTAATTATA TGGCAGAGCA GGTGGAGACT
TTGCTTAATG GGCAAAAGCG TCTATTGGCA GACATATCTC ACGAATTACG CTCTCCATTA
ACGCGGATGC AACTCGCCAT TGGTATCGCT CAGCAACAAG AGCCGTCGAG CAACACAAAA
AGTAACGAGC AAGCATTAGC TAGAATTGAA AAAGAAGCGC ATCAGATGGA GCATATGGTC
GCTCAAGTGT TGATGTTGTC GCGATTAGAT AATAACGCTC GGGATTCGAA AAAGCAGCCG
GTGAGTTTTG ATACACTTTT AACAGAGCTA TTAGCCGACT GCGAGTTCGA AGCCCAATCA
CAAGGCAAAA CGTTAACGGT AGATATTGAT TCTGATGCGA AAATAAATGC TGACGAAGAT
TTATTAACAA GCGGTATTGA AAATGTTCTG CGCAACGCCG TGAAATACGC AAATCAGCAG
GTGTCTTTCA CCCTGAAAAT TGACGGCCCT GACGTTAACT TAGTTATTTG TGATGACGGC
AAAGGCATAC CGGATTCAGA TTTAGAGCAT ATCTTTCAGC CCTTTTACCG TGTTTCAAGC
GCAAGAGAGC GAGACAGTGG TGGAATAGGG TTAGGCTTGG CAATTGCCAG TCGCGCCATT
GCTGCACATG AGGGCACAAT TGAAGCCCGC AACCGAGTTA AGGGTGGCTT GAGCGTGCAT
ATTCGATTGC CGATAATGGC TTAG
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| Protein sequence | MRRLLYLNPF RSLYGRIFLW FWGTTIVMIV GAYWIMQNIA PPVEYLPMDD KQHFMLENSV
RALQRQVSRS PDGEPLENIL ERTSQRGKLM MILLNPKTKS FTLKGPLPRL PNEKPFLDLI
GSANPLRIAT PIGDMFGPMA TDIAGTEYLL FVGRIRPMGF ASDMRHRPPL LLICLVLLIS
AVLCSLIAWS LVKPLKQLQV ATKRMASGAL SSRVGSASYR GDEIGRLGRD FNYMAEQVET
LLNGQKRLLA DISHELRSPL TRMQLAIGIA QQQEPSSNTK SNEQALARIE KEAHQMEHMV
AQVLMLSRLD NNARDSKKQP VSFDTLLTEL LADCEFEAQS QGKTLTVDID SDAKINADED
LLTSGIENVL RNAVKYANQQ VSFTLKIDGP DVNLVICDDG KGIPDSDLEH IFQPFYRVSS
ARERDSGGIG LGLAIASRAI AAHEGTIEAR NRVKGGLSVH IRLPIMA
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