| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0978 |
|---|
| Symbol | |
|---|
| ID | 4173827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1169201 |
|---|
| End bp | 1170577 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638053979 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_660558 |
|---|
| Protein GI | 109897303 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGT GGGGCGGACG TTTTCAAGAT GGCAGCAGTG CGATGTTTCG CACTGTTAAC
GATTCACTGC CATTCGACAG AGTATTGGCG AGCCAAGATA TTCGCGGCTC AATAGCATGG
GCACGTGCCA TTGCAAAAGC GGGGGTACTG AACCAAGACG AGCACCAACA GCTTGAAGAA
GCCCTTAAAG CCTTGTTGGT CAAAGCGGAT GCCGGTGAGC TCGATTTTGA CGCCAGCAGT
GAAGAAGATA TTCACAGCTT TGTAGAAGCA ACCTTAATCG AGCAACTCGG CGATGTGGCG
CGCAAATTAC ACACTGGCCG CAGCCGTAAC GACCAAGTTG CCACGGATTT TCGTTTATGG
ACCCGTGAAC ACGTTGATTT ACTGGTTGAG GATGTTGAAG CGGTTATTGC GTCATTAGTG
GGTAACGCTG ATGTCAATCA AGACGTTATT TTACCTGGCT ACACCCACTT GCAGCGTGCT
CAACCGGTGC GCTACCCGCA CTGGTGCTTG GCCTATGTTG AAATGCTAAA ACGCGATTTG
AGTCGTCTGC ATGACTTAAA AGCCCGTTTG AATCAGTGTC CTTTAGGTAG CGGTGCACTT
GCTGGCACAA CCTACCCTAT CGACCGTCAA GCGATTGCCG AAGAGCTTGG TTTTGACAGC
CCGTGCATCA ACAGCCTTGA TGCGGTATCT GATCGTGATT ACGTGCTAGA GCTTCTTTTT
GTCGCCAGTA CCAGCATGAT GCACTTGTCG CGTATGGCGG AAGATTTAAT CTTCTACAAC
TCAGGCGAGG CAGGTTTTAT ACAGTTAGGT GACGCGGTTA CTTCTGGTTC ATCCTTGATG
CCTCAGAAGA AAAACCCTGA TGCATTAGAG CTGATGCGCG GTAAATGTGG GCGAGTGTTC
GGTAGCTTAC AAGCCTTGCT TGTGACCATG AAAGGTCTGC CCCTTGCGTA TAACAAAGAT
ATGCAAGAAG ACAAAGAAGG CTTGTTCGAC GCGACGAATC AATGGCATAT CTGTTTACGC
ATCGCTTGTG AAGTGGTTGA TAGCATCAAA CTTGATAGCG AGCGCTGCGC GAAAGCCGCC
CGTGAGGGTT ATGCTAATGC GACTGAGCTC GCTGATTACC TTGTCGATAA GGGGATTCCG
TTTAGAACCG CCCACGATAT TTCTGGCCGA GTCGTGCTGG ACGCCCTCGA AAAGAAAAAG
GCCATTGAAG AGCTCACTAT CGCTGAGCTT AAAGTGTATT CAGACGTTAT AGAAGAGGAT
GTCTACCCTG TTCTACAACT TGAATATTTG GTCAACAAGC GCGACATCTT GGGTGGAACG
GGCATTAAGC CTGTACTCGA AGCGCTGGCT AATGCTAAAG CATCGTTCAA AAAATAG
|
|---|
| Protein sequence | MSLWGGRFQD GSSAMFRTVN DSLPFDRVLA SQDIRGSIAW ARAIAKAGVL NQDEHQQLEE
ALKALLVKAD AGELDFDASS EEDIHSFVEA TLIEQLGDVA RKLHTGRSRN DQVATDFRLW
TREHVDLLVE DVEAVIASLV GNADVNQDVI LPGYTHLQRA QPVRYPHWCL AYVEMLKRDL
SRLHDLKARL NQCPLGSGAL AGTTYPIDRQ AIAEELGFDS PCINSLDAVS DRDYVLELLF
VASTSMMHLS RMAEDLIFYN SGEAGFIQLG DAVTSGSSLM PQKKNPDALE LMRGKCGRVF
GSLQALLVTM KGLPLAYNKD MQEDKEGLFD ATNQWHICLR IACEVVDSIK LDSERCAKAA
REGYANATEL ADYLVDKGIP FRTAHDISGR VVLDALEKKK AIEELTIAEL KVYSDVIEED
VYPVLQLEYL VNKRDILGGT GIKPVLEALA NAKASFKK
|
|---|
| |